Gene: AT5G40390
     

Gene description


TAIR ID: AT5G40390

Short description: Raffinose synthase family protein

Pathogen responsiveness: -1.24

General responsiveness: 0.27

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G150906  

Wheat: No orthologous gene

GO biological process


sucrose biosynthetic process, response to water deprivation, response to abscisic acid, raffinose family oligosaccharide biosynthetic process, response to oxidative stress, mannitol biosynthetic process, carbohydrate metabolic process


GO cellular component


cytoplasm, chloroplast


GO molecular function


hydrolase activity, hydrolyzing O-glycosyl compounds, galactinol-sucrose galactosyltransferase activity


Protein domain


PfamPF05691, Raffinose synthase or seed imbibition protein Sip1

Transcriptional regulation


Regulator:
AT1G51600

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-1.631.41E-09
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-1.552.19E-09
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-1.634.89E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-2.058.54E-04






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