Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G40390

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0035437: maintenance of protein localization in endoplasmic reticulum0.00E+00
2GO:0042353: fucose biosynthetic process0.00E+00
3GO:0010046: response to mycotoxin0.00E+00
4GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome0.00E+00
5GO:0009611: response to wounding1.13E-06
6GO:0009873: ethylene-activated signaling pathway3.23E-06
7GO:0006633: fatty acid biosynthetic process5.48E-06
8GO:0010025: wax biosynthetic process3.93E-05
9GO:0006631: fatty acid metabolic process7.14E-05
10GO:0042335: cuticle development1.20E-04
11GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway1.31E-04
12GO:0045489: pectin biosynthetic process1.34E-04
13GO:2000070: regulation of response to water deprivation1.67E-04
14GO:0009609: response to symbiotic bacterium2.02E-04
15GO:0051180: vitamin transport2.02E-04
16GO:0030974: thiamine pyrophosphate transport2.02E-04
17GO:0006680: glucosylceramide catabolic process2.02E-04
18GO:0080051: cutin transport2.02E-04
19GO:0009827: plant-type cell wall modification2.08E-04
20GO:0006970: response to osmotic stress2.39E-04
21GO:0042545: cell wall modification2.47E-04
22GO:0098656: anion transmembrane transport2.53E-04
23GO:0010029: regulation of seed germination3.24E-04
24GO:0010200: response to chitin3.33E-04
25GO:0030148: sphingolipid biosynthetic process4.10E-04
26GO:0000038: very long-chain fatty acid metabolic process4.10E-04
27GO:2000030: regulation of response to red or far red light4.52E-04
28GO:0015908: fatty acid transport4.52E-04
29GO:0006898: receptor-mediated endocytosis4.52E-04
30GO:0015893: drug transport4.52E-04
31GO:1901679: nucleotide transmembrane transport4.52E-04
32GO:0071395: cellular response to jasmonic acid stimulus4.52E-04
33GO:0031407: oxylipin metabolic process4.52E-04
34GO:0010289: homogalacturonan biosynthetic process4.52E-04
35GO:0010143: cutin biosynthetic process6.01E-04
36GO:0045490: pectin catabolic process6.15E-04
37GO:0009751: response to salicylic acid6.19E-04
38GO:0070588: calcium ion transmembrane transport6.71E-04
39GO:0009737: response to abscisic acid7.35E-04
40GO:0080121: AMP transport7.36E-04
41GO:0080168: abscisic acid transport7.36E-04
42GO:0016045: detection of bacterium7.36E-04
43GO:0010359: regulation of anion channel activity7.36E-04
44GO:0010288: response to lead ion7.36E-04
45GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid7.36E-04
46GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'7.36E-04
47GO:0009863: salicylic acid mediated signaling pathway8.26E-04
48GO:0031408: oxylipin biosynthetic process9.94E-04
49GO:0030100: regulation of endocytosis1.05E-03
50GO:0009809: lignin biosynthetic process1.15E-03
51GO:0001944: vasculature development1.18E-03
52GO:0070417: cellular response to cold1.38E-03
53GO:0015867: ATP transport1.40E-03
54GO:0071585: detoxification of cadmium ion1.40E-03
55GO:0042991: transcription factor import into nucleus1.40E-03
56GO:1902347: response to strigolactone1.40E-03
57GO:0009694: jasmonic acid metabolic process1.40E-03
58GO:0010222: stem vascular tissue pattern formation1.40E-03
59GO:0046345: abscisic acid catabolic process1.40E-03
60GO:0006665: sphingolipid metabolic process1.78E-03
61GO:0009624: response to nematode1.79E-03
62GO:0010193: response to ozone1.98E-03
63GO:0000302: response to reactive oxygen species1.98E-03
64GO:0035435: phosphate ion transmembrane transport2.19E-03
65GO:0009913: epidermal cell differentiation2.19E-03
66GO:0006751: glutathione catabolic process2.19E-03
67GO:0015866: ADP transport2.19E-03
68GO:0010256: endomembrane system organization2.19E-03
69GO:0098655: cation transmembrane transport2.63E-03
70GO:0009861: jasmonic acid and ethylene-dependent systemic resistance2.63E-03
71GO:0010555: response to mannitol2.63E-03
72GO:1902074: response to salt3.09E-03
73GO:0006401: RNA catabolic process3.09E-03
74GO:0071446: cellular response to salicylic acid stimulus3.09E-03
75GO:0030497: fatty acid elongation3.09E-03
76GO:0008610: lipid biosynthetic process3.59E-03
77GO:1900150: regulation of defense response to fungus3.59E-03
78GO:0007155: cell adhesion3.59E-03
79GO:0090305: nucleic acid phosphodiester bond hydrolysis4.65E-03
80GO:0010345: suberin biosynthetic process4.65E-03
81GO:0016051: carbohydrate biosynthetic process4.69E-03
82GO:0048268: clathrin coat assembly5.21E-03
83GO:0042761: very long-chain fatty acid biosynthetic process5.21E-03
84GO:2000280: regulation of root development5.21E-03
85GO:0006839: mitochondrial transport5.34E-03
86GO:0006897: endocytosis5.57E-03
87GO:0019538: protein metabolic process5.80E-03
88GO:0071555: cell wall organization5.96E-03
89GO:0052544: defense response by callose deposition in cell wall6.41E-03
90GO:0008285: negative regulation of cell proliferation6.41E-03
91GO:0010015: root morphogenesis6.41E-03
92GO:0016024: CDP-diacylglycerol biosynthetic process7.04E-03
93GO:0010105: negative regulation of ethylene-activated signaling pathway7.04E-03
94GO:0071365: cellular response to auxin stimulus7.04E-03
95GO:0009416: response to light stimulus7.09E-03
96GO:0010588: cotyledon vascular tissue pattern formation7.70E-03
97GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway8.55E-03
98GO:0009969: xyloglucan biosynthetic process9.07E-03
99GO:0048367: shoot system development9.95E-03
100GO:0009409: response to cold1.01E-02
101GO:0045892: negative regulation of transcription, DNA-templated1.05E-02
102GO:2000377: regulation of reactive oxygen species metabolic process1.05E-02
103GO:0009620: response to fungus1.06E-02
104GO:0009695: jasmonic acid biosynthetic process1.13E-02
105GO:0009269: response to desiccation1.21E-02
106GO:0009814: defense response, incompatible interaction1.29E-02
107GO:0031348: negative regulation of defense response1.29E-02
108GO:0048443: stamen development1.45E-02
109GO:0009753: response to jasmonic acid1.47E-02
110GO:0006468: protein phosphorylation1.53E-02
111GO:0000271: polysaccharide biosynthetic process1.62E-02
112GO:0006520: cellular amino acid metabolic process1.71E-02
113GO:0010268: brassinosteroid homeostasis1.71E-02
114GO:0009651: response to salt stress1.76E-02
115GO:0006952: defense response1.83E-02
116GO:0010183: pollen tube guidance1.89E-02
117GO:0009414: response to water deprivation1.98E-02
118GO:0016132: brassinosteroid biosynthetic process1.99E-02
119GO:0007623: circadian rhythm2.01E-02
120GO:0010150: leaf senescence2.01E-02
121GO:0019760: glucosinolate metabolic process2.28E-02
122GO:0009639: response to red or far red light2.28E-02
123GO:0016125: sterol metabolic process2.28E-02
124GO:0007166: cell surface receptor signaling pathway2.30E-02
125GO:0006904: vesicle docking involved in exocytosis2.38E-02
126GO:0009617: response to bacterium2.40E-02
127GO:0009733: response to auxin2.44E-02
128GO:0009816: defense response to bacterium, incompatible interaction2.69E-02
129GO:0009627: systemic acquired resistance2.80E-02
130GO:0051301: cell division3.08E-02
131GO:0009817: defense response to fungus, incompatible interaction3.12E-02
132GO:0030244: cellulose biosynthetic process3.12E-02
133GO:0010311: lateral root formation3.23E-02
134GO:0009834: plant-type secondary cell wall biogenesis3.35E-02
135GO:0010119: regulation of stomatal movement3.46E-02
136GO:0009723: response to ethylene3.60E-02
137GO:0006351: transcription, DNA-templated3.65E-02
138GO:0055114: oxidation-reduction process4.40E-02
139GO:0009640: photomorphogenesis4.42E-02
140GO:0051707: response to other organism4.42E-02
141GO:0009644: response to high light intensity4.68E-02
142GO:0006855: drug transmembrane transport4.93E-02
RankGO TermAdjusted P value
1GO:0070566: adenylyltransferase activity0.00E+00
2GO:0052631: sphingolipid delta-8 desaturase activity0.00E+00
3GO:0080123: jasmonate-amino synthetase activity0.00E+00
4GO:0070330: aromatase activity1.06E-08
5GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.24E-08
6GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.24E-08
7GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.24E-08
8GO:0018685: alkane 1-monooxygenase activity3.44E-07
9GO:0009922: fatty acid elongase activity3.44E-07
10GO:0016629: 12-oxophytodienoate reductase activity1.93E-06
11GO:0052747: sinapyl alcohol dehydrogenase activity1.67E-04
12GO:0045330: aspartyl esterase activity1.70E-04
13GO:0090440: abscisic acid transporter activity2.02E-04
14GO:0031957: very long-chain fatty acid-CoA ligase activity2.02E-04
15GO:0004348: glucosylceramidase activity2.02E-04
16GO:0015245: fatty acid transporter activity2.02E-04
17GO:0090422: thiamine pyrophosphate transporter activity2.02E-04
18GO:0030599: pectinesterase activity2.35E-04
19GO:0016746: transferase activity, transferring acyl groups2.72E-04
20GO:0004103: choline kinase activity4.52E-04
21GO:0017040: ceramidase activity4.52E-04
22GO:0003839: gamma-glutamylcyclotransferase activity4.52E-04
23GO:0045551: cinnamyl-alcohol dehydrogenase activity4.70E-04
24GO:0010295: (+)-abscisic acid 8'-hydroxylase activity7.36E-04
25GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.08E-03
26GO:0010181: FMN binding1.72E-03
27GO:0080122: AMP transmembrane transporter activity1.78E-03
28GO:0070696: transmembrane receptor protein serine/threonine kinase binding1.78E-03
29GO:0004674: protein serine/threonine kinase activity1.96E-03
30GO:0043565: sequence-specific DNA binding2.16E-03
31GO:0004366: glycerol-3-phosphate O-acyltransferase activity2.19E-03
32GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity2.19E-03
33GO:0102391: decanoate--CoA ligase activity2.63E-03
34GO:0005347: ATP transmembrane transporter activity2.63E-03
35GO:0015217: ADP transmembrane transporter activity2.63E-03
36GO:0019899: enzyme binding3.09E-03
37GO:0004467: long-chain fatty acid-CoA ligase activity3.09E-03
38GO:0016621: cinnamoyl-CoA reductase activity3.09E-03
39GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.27E-03
40GO:0008757: S-adenosylmethionine-dependent methyltransferase activity3.52E-03
41GO:0004864: protein phosphatase inhibitor activity5.80E-03
42GO:0004713: protein tyrosine kinase activity5.80E-03
43GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity5.80E-03
44GO:0005545: 1-phosphatidylinositol binding5.80E-03
45GO:0005388: calcium-transporting ATPase activity7.70E-03
46GO:0000175: 3'-5'-exoribonuclease activity7.70E-03
47GO:0005315: inorganic phosphate transmembrane transporter activity7.70E-03
48GO:0005262: calcium channel activity7.70E-03
49GO:0019888: protein phosphatase regulator activity7.70E-03
50GO:0015114: phosphate ion transmembrane transporter activity7.70E-03
51GO:0008146: sulfotransferase activity9.07E-03
52GO:0004857: enzyme inhibitor activity1.05E-02
53GO:0051087: chaperone binding1.13E-02
54GO:0004540: ribonuclease activity1.21E-02
55GO:0019825: oxygen binding1.21E-02
56GO:0016758: transferase activity, transferring hexosyl groups1.42E-02
57GO:0008514: organic anion transmembrane transporter activity1.45E-02
58GO:0005199: structural constituent of cell wall1.71E-02
59GO:0030276: clathrin binding1.71E-02
60GO:0005506: iron ion binding2.01E-02
61GO:0004518: nuclease activity2.08E-02
62GO:0005524: ATP binding2.28E-02
63GO:0016791: phosphatase activity2.28E-02
64GO:0016413: O-acetyltransferase activity2.48E-02
65GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.56E-02
66GO:0015238: drug transmembrane transporter activity3.23E-02
67GO:0004842: ubiquitin-protein transferase activity3.31E-02
68GO:0020037: heme binding4.00E-02
69GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting4.61E-02
70GO:0043621: protein self-association4.68E-02
RankGO TermAdjusted P value
1GO:0046658: anchored component of plasma membrane1.60E-05
2GO:0005768: endosome3.49E-04
3GO:0016021: integral component of membrane3.67E-04
4GO:0009897: external side of plasma membrane7.36E-04
5GO:0009530: primary cell wall7.36E-04
6GO:0000178: exosome (RNase complex)1.78E-03
7GO:0030173: integral component of Golgi membrane2.63E-03
8GO:0031225: anchored component of membrane3.78E-03
9GO:0005802: trans-Golgi network3.96E-03
10GO:0005783: endoplasmic reticulum4.78E-03
11GO:0016604: nuclear body5.21E-03
12GO:0005886: plasma membrane5.31E-03
13GO:0000159: protein phosphatase type 2A complex6.41E-03
14GO:0009505: plant-type cell wall8.83E-03
15GO:0005905: clathrin-coated pit1.21E-02
16GO:0005743: mitochondrial inner membrane1.23E-02
17GO:0005789: endoplasmic reticulum membrane1.24E-02
18GO:0030136: clathrin-coated vesicle1.54E-02
19GO:0016020: membrane1.69E-02
20GO:0005770: late endosome1.71E-02
21GO:0000145: exocyst2.08E-02
22GO:0071944: cell periphery2.18E-02
23GO:0005794: Golgi apparatus2.26E-02
24GO:0032580: Golgi cisterna membrane2.28E-02
25GO:0005778: peroxisomal membrane2.38E-02
26GO:0005618: cell wall2.41E-02
27GO:0000932: P-body2.58E-02
28GO:0005788: endoplasmic reticulum lumen2.69E-02
29GO:0000139: Golgi membrane3.21E-02
30GO:0031902: late endosome membrane4.18E-02
31GO:0005737: cytoplasm4.73E-02
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Gene type



Gene DE type