gene detail

Gene description

TAIR ID: AT5G22920

Short description: CHY-type/CTCHY-type/RING-type Zinc finger protein

Pathogen responsiveness: 0.82

General responsiveness: 1.05

Orthologous

Rice:

OS10G0456800 OS12G0538500

Maize:

GRMZM2G144782

Wheat:

TA.2460.1.S1_X_AT

GO biological process

protein ubiquitination, regulation of stomatal opening

GO cellular component

nucleus, endoplasmic reticulum

GO molecular function

transferase activity, zinc ion binding

Protein domain

Pfam	PF13639, Ring finger domain
Pfam	PF14599, Zinc-ribbon
Pfam	PF05495, CHY zinc finger
SMART	SM00184, RING

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04120: Ubiquitin mediated proteolysis

Transcriptional regulation

Regulator:
AT5G13790, AT1G73805, AT5G26920, AT2G01570, AT2G43010

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_EDS16_GO  view
GSE26679_EDR1_GC  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

20 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Penta, control	Penta, Flg22 2 h	-2.22	2.86E-02
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.29	2.54E-05
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	-1.89	3.06E-05
GSE26206	Col, WT, control	Col, WT, R.solani_AG2_1 7 d	-1.61	8.64E-03
GSE26679	Col, WT, GC 0 h	Col, WT, GC 96 h	-3.74	1.27E-13
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 96 h	-2.78	4.45E-11
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-3.47	5.96E-13
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-3.75	3.02E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-4.85	7.27E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-2.88	1.12E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-4.38	2.36E-14
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-3.66	1.67E-13
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-3.45	5.84E-13
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-4.15	1.10E-14
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	-3.22	1.52E-12
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	2.74	4.49E-05
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_24 h	1.77	4.39E-03
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	2.89	2.16E-05
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.13	1.26E-02
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.72	3.40E-03