gene detail

Gene description

TAIR ID: AT5G22650

Short description: histone deacetylase 2B

Pathogen responsiveness: -2.30

General responsiveness: -1.04

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat:

TA.14528.1.S1_AT TA.14528.1.S1_S_AT

GO biological process

negative regulation of transcription, DNA-templated, DNA mediated transformation, root development, seed dormancy process, polarity specification of adaxial/abaxial axis

GO cellular component

nucleus, vacuolar membrane, cell wall, nucleolus, cytosol, mitochondrion

GO molecular function

histone deacetylase activity

Protein domain

No domain annotation

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G17430

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 4

click to view PPI network

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.82	4.39E-05