GO Enrichment Analysis of Co-expressed Genes with
AT5G22650
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000495: box H/ACA snoRNA 3'-end processing | 0.00E+00 |
| 2 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 3 | GO:0071433: cell wall repair | 0.00E+00 |
| 4 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 5 | GO:0090069: regulation of ribosome biogenesis | 0.00E+00 |
| 6 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 7 | GO:1990481: mRNA pseudouridine synthesis | 0.00E+00 |
| 8 | GO:0019427: acetyl-CoA biosynthetic process from acetate | 0.00E+00 |
| 9 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 10 | GO:0042430: indole-containing compound metabolic process | 0.00E+00 |
| 11 | GO:0000460: maturation of 5.8S rRNA | 1.36E-05 |
| 12 | GO:0034976: response to endoplasmic reticulum stress | 1.40E-05 |
| 13 | GO:0000027: ribosomal large subunit assembly | 1.67E-05 |
| 14 | GO:0006457: protein folding | 2.44E-05 |
| 15 | GO:0000470: maturation of LSU-rRNA | 3.36E-05 |
| 16 | GO:0010197: polar nucleus fusion | 5.15E-05 |
| 17 | GO:0046686: response to cadmium ion | 5.22E-05 |
| 18 | GO:0031120: snRNA pseudouridine synthesis | 1.27E-04 |
| 19 | GO:0031118: rRNA pseudouridine synthesis | 1.27E-04 |
| 20 | GO:0006083: acetate metabolic process | 1.27E-04 |
| 21 | GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine | 1.27E-04 |
| 22 | GO:0006430: lysyl-tRNA aminoacylation | 1.27E-04 |
| 23 | GO:2000232: regulation of rRNA processing | 1.27E-04 |
| 24 | GO:0006413: translational initiation | 1.97E-04 |
| 25 | GO:0006099: tricarboxylic acid cycle | 2.67E-04 |
| 26 | GO:0006626: protein targeting to mitochondrion | 2.83E-04 |
| 27 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 2.94E-04 |
| 28 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 2.94E-04 |
| 29 | GO:0010155: regulation of proton transport | 2.94E-04 |
| 30 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 2.94E-04 |
| 31 | GO:0042254: ribosome biogenesis | 4.61E-04 |
| 32 | GO:1902626: assembly of large subunit precursor of preribosome | 4.86E-04 |
| 33 | GO:0045039: protein import into mitochondrial inner membrane | 4.86E-04 |
| 34 | GO:0006364: rRNA processing | 5.18E-04 |
| 35 | GO:0007005: mitochondrion organization | 5.89E-04 |
| 36 | GO:0007276: gamete generation | 6.95E-04 |
| 37 | GO:0009855: determination of bilateral symmetry | 6.95E-04 |
| 38 | GO:0045454: cell redox homeostasis | 8.16E-04 |
| 39 | GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA | 9.21E-04 |
| 40 | GO:0046345: abscisic acid catabolic process | 9.21E-04 |
| 41 | GO:0042273: ribosomal large subunit biogenesis | 9.21E-04 |
| 42 | GO:0031365: N-terminal protein amino acid modification | 1.16E-03 |
| 43 | GO:0010405: arabinogalactan protein metabolic process | 1.43E-03 |
| 44 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 1.43E-03 |
| 45 | GO:0000741: karyogamy | 1.43E-03 |
| 46 | GO:1900056: negative regulation of leaf senescence | 2.01E-03 |
| 47 | GO:0080186: developmental vegetative growth | 2.01E-03 |
| 48 | GO:0006189: 'de novo' IMP biosynthetic process | 3.00E-03 |
| 49 | GO:0007338: single fertilization | 3.00E-03 |
| 50 | GO:0010205: photoinhibition | 3.36E-03 |
| 51 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 3.36E-03 |
| 52 | GO:0010162: seed dormancy process | 3.73E-03 |
| 53 | GO:0072593: reactive oxygen species metabolic process | 4.12E-03 |
| 54 | GO:0016485: protein processing | 4.12E-03 |
| 55 | GO:0071365: cellular response to auxin stimulus | 4.52E-03 |
| 56 | GO:0010075: regulation of meristem growth | 4.93E-03 |
| 57 | GO:0009651: response to salt stress | 4.99E-03 |
| 58 | GO:0009934: regulation of meristem structural organization | 5.36E-03 |
| 59 | GO:0048467: gynoecium development | 5.36E-03 |
| 60 | GO:0046688: response to copper ion | 5.80E-03 |
| 61 | GO:0009553: embryo sac development | 5.91E-03 |
| 62 | GO:0006487: protein N-linked glycosylation | 6.71E-03 |
| 63 | GO:0009863: salicylic acid mediated signaling pathway | 6.71E-03 |
| 64 | GO:0030150: protein import into mitochondrial matrix | 6.71E-03 |
| 65 | GO:0009944: polarity specification of adaxial/abaxial axis | 6.71E-03 |
| 66 | GO:0006825: copper ion transport | 7.19E-03 |
| 67 | GO:0051302: regulation of cell division | 7.19E-03 |
| 68 | GO:0015992: proton transport | 7.68E-03 |
| 69 | GO:0006334: nucleosome assembly | 7.68E-03 |
| 70 | GO:0030433: ubiquitin-dependent ERAD pathway | 8.18E-03 |
| 71 | GO:0009793: embryo development ending in seed dormancy | 8.28E-03 |
| 72 | GO:0009294: DNA mediated transformation | 8.69E-03 |
| 73 | GO:0009306: protein secretion | 9.21E-03 |
| 74 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 9.75E-03 |
| 75 | GO:0008033: tRNA processing | 1.03E-02 |
| 76 | GO:0009960: endosperm development | 1.09E-02 |
| 77 | GO:0006412: translation | 1.17E-02 |
| 78 | GO:0009567: double fertilization forming a zygote and endosperm | 1.44E-02 |
| 79 | GO:0016049: cell growth | 1.90E-02 |
| 80 | GO:0046777: protein autophosphorylation | 2.17E-02 |
| 81 | GO:0048527: lateral root development | 2.19E-02 |
| 82 | GO:0045087: innate immune response | 2.33E-02 |
| 83 | GO:0009867: jasmonic acid mediated signaling pathway | 2.33E-02 |
| 84 | GO:0006631: fatty acid metabolic process | 2.64E-02 |
| 85 | GO:0032259: methylation | 2.87E-02 |
| 86 | GO:0009644: response to high light intensity | 2.96E-02 |
| 87 | GO:0009408: response to heat | 2.99E-02 |
| 88 | GO:0000154: rRNA modification | 3.04E-02 |
| 89 | GO:0006486: protein glycosylation | 3.46E-02 |
| 90 | GO:0009909: regulation of flower development | 3.72E-02 |
| 91 | GO:0006417: regulation of translation | 3.72E-02 |
| 92 | GO:0015031: protein transport | 4.01E-02 |
| 93 | GO:0009734: auxin-activated signaling pathway | 4.21E-02 |
| 94 | GO:0016569: covalent chromatin modification | 4.26E-02 |
| 95 | GO:0009409: response to cold | 4.33E-02 |
| 96 | GO:0018105: peptidyl-serine phosphorylation | 4.53E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004164: diphthine synthase activity | 0.00E+00 |
| 2 | GO:0050220: prostaglandin-E synthase activity | 0.00E+00 |
| 3 | GO:0000166: nucleotide binding | 3.79E-09 |
| 4 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 8.20E-07 |
| 5 | GO:0043021: ribonucleoprotein complex binding | 8.20E-07 |
| 6 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 8.20E-07 |
| 7 | GO:0051082: unfolded protein binding | 8.51E-05 |
| 8 | GO:0048037: cofactor binding | 1.27E-04 |
| 9 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 1.27E-04 |
| 10 | GO:0042134: rRNA primary transcript binding | 1.27E-04 |
| 11 | GO:0004638: phosphoribosylaminoimidazole carboxylase activity | 1.27E-04 |
| 12 | GO:0003987: acetate-CoA ligase activity | 1.27E-04 |
| 13 | GO:0004824: lysine-tRNA ligase activity | 1.27E-04 |
| 14 | GO:0005524: ATP binding | 1.60E-04 |
| 15 | GO:0003743: translation initiation factor activity | 2.86E-04 |
| 16 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 2.94E-04 |
| 17 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 2.94E-04 |
| 18 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 2.94E-04 |
| 19 | GO:0052692: raffinose alpha-galactosidase activity | 4.86E-04 |
| 20 | GO:0008469: histone-arginine N-methyltransferase activity | 4.86E-04 |
| 21 | GO:0016531: copper chaperone activity | 4.86E-04 |
| 22 | GO:0004557: alpha-galactosidase activity | 4.86E-04 |
| 23 | GO:0003756: protein disulfide isomerase activity | 6.94E-04 |
| 24 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 6.95E-04 |
| 25 | GO:0003729: mRNA binding | 1.01E-03 |
| 26 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.16E-03 |
| 27 | GO:0003723: RNA binding | 1.17E-03 |
| 28 | GO:0016208: AMP binding | 1.43E-03 |
| 29 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 1.43E-03 |
| 30 | GO:0031369: translation initiation factor binding | 1.43E-03 |
| 31 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.97E-03 |
| 32 | GO:0008235: metalloexopeptidase activity | 2.01E-03 |
| 33 | GO:0004427: inorganic diphosphatase activity | 2.01E-03 |
| 34 | GO:0030515: snoRNA binding | 2.01E-03 |
| 35 | GO:0003746: translation elongation factor activity | 2.48E-03 |
| 36 | GO:0008168: methyltransferase activity | 2.62E-03 |
| 37 | GO:0001055: RNA polymerase II activity | 3.36E-03 |
| 38 | GO:0001054: RNA polymerase I activity | 4.12E-03 |
| 39 | GO:0004177: aminopeptidase activity | 4.12E-03 |
| 40 | GO:0008378: galactosyltransferase activity | 4.52E-03 |
| 41 | GO:0001056: RNA polymerase III activity | 4.52E-03 |
| 42 | GO:0031072: heat shock protein binding | 4.93E-03 |
| 43 | GO:0009982: pseudouridine synthase activity | 4.93E-03 |
| 44 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 4.93E-03 |
| 45 | GO:0003712: transcription cofactor activity | 5.80E-03 |
| 46 | GO:0015035: protein disulfide oxidoreductase activity | 6.27E-03 |
| 47 | GO:0003735: structural constituent of ribosome | 6.37E-03 |
| 48 | GO:0004407: histone deacetylase activity | 6.71E-03 |
| 49 | GO:0005528: FK506 binding | 6.71E-03 |
| 50 | GO:0016758: transferase activity, transferring hexosyl groups | 7.42E-03 |
| 51 | GO:0016887: ATPase activity | 1.03E-02 |
| 52 | GO:0004527: exonuclease activity | 1.09E-02 |
| 53 | GO:0003713: transcription coactivator activity | 1.09E-02 |
| 54 | GO:0010181: FMN binding | 1.14E-02 |
| 55 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.77E-02 |
| 56 | GO:0004721: phosphoprotein phosphatase activity | 1.83E-02 |
| 57 | GO:0004683: calmodulin-dependent protein kinase activity | 1.83E-02 |
| 58 | GO:0005507: copper ion binding | 1.92E-02 |
| 59 | GO:0005515: protein binding | 2.08E-02 |
| 60 | GO:0050897: cobalt ion binding | 2.19E-02 |
| 61 | GO:0005525: GTP binding | 2.30E-02 |
| 62 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 2.48E-02 |
| 63 | GO:0042393: histone binding | 2.56E-02 |
| 64 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.56E-02 |
| 65 | GO:0046872: metal ion binding | 2.57E-02 |
| 66 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.12E-02 |
| 67 | GO:0009055: electron carrier activity | 3.21E-02 |
| 68 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.46E-02 |
| 69 | GO:0016298: lipase activity | 3.54E-02 |
| 70 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 4.16E-02 |
| 71 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 4.16E-02 |
| 72 | GO:0016746: transferase activity, transferring acyl groups | 4.53E-02 |
| 73 | GO:0008026: ATP-dependent helicase activity | 4.63E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034455: t-UTP complex | 0.00E+00 |
| 2 | GO:0070545: PeBoW complex | 0.00E+00 |
| 3 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 4 | GO:0005730: nucleolus | 1.55E-14 |
| 5 | GO:0030687: preribosome, large subunit precursor | 6.12E-07 |
| 6 | GO:0005852: eukaryotic translation initiation factor 3 complex | 4.74E-06 |
| 7 | GO:0005788: endoplasmic reticulum lumen | 5.60E-06 |
| 8 | GO:0005758: mitochondrial intermembrane space | 1.67E-05 |
| 9 | GO:0005829: cytosol | 2.10E-05 |
| 10 | GO:0005774: vacuolar membrane | 2.44E-05 |
| 11 | GO:0009506: plasmodesma | 6.10E-05 |
| 12 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 6.55E-05 |
| 13 | GO:0005783: endoplasmic reticulum | 7.39E-05 |
| 14 | GO:0045252: oxoglutarate dehydrogenase complex | 1.27E-04 |
| 15 | GO:0005834: heterotrimeric G-protein complex | 6.91E-04 |
| 16 | GO:0031429: box H/ACA snoRNP complex | 6.95E-04 |
| 17 | GO:0008250: oligosaccharyltransferase complex | 1.16E-03 |
| 18 | GO:0005739: mitochondrion | 1.42E-03 |
| 19 | GO:0031428: box C/D snoRNP complex | 1.43E-03 |
| 20 | GO:0009514: glyoxysome | 2.65E-03 |
| 21 | GO:0005736: DNA-directed RNA polymerase I complex | 3.00E-03 |
| 22 | GO:0005666: DNA-directed RNA polymerase III complex | 3.36E-03 |
| 23 | GO:0000418: DNA-directed RNA polymerase IV complex | 3.73E-03 |
| 24 | GO:0005794: Golgi apparatus | 3.93E-03 |
| 25 | GO:0032040: small-subunit processome | 4.52E-03 |
| 26 | GO:0005665: DNA-directed RNA polymerase II, core complex | 4.52E-03 |
| 27 | GO:0005743: mitochondrial inner membrane | 5.39E-03 |
| 28 | GO:0005618: cell wall | 6.90E-03 |
| 29 | GO:0005654: nucleoplasm | 7.42E-03 |
| 30 | GO:0005840: ribosome | 8.32E-03 |
| 31 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 9.21E-03 |
| 32 | GO:0005759: mitochondrial matrix | 9.58E-03 |
| 33 | GO:0016592: mediator complex | 1.32E-02 |
| 34 | GO:0005789: endoplasmic reticulum membrane | 1.47E-02 |
| 35 | GO:0000932: P-body | 1.63E-02 |
| 36 | GO:0019005: SCF ubiquitin ligase complex | 1.97E-02 |
| 37 | GO:0022625: cytosolic large ribosomal subunit | 2.13E-02 |
| 38 | GO:0015934: large ribosomal subunit | 2.19E-02 |
| 39 | GO:0005773: vacuole | 3.41E-02 |
| 40 | GO:0000502: proteasome complex | 3.46E-02 |
| 41 | GO:0009505: plant-type cell wall | 3.94E-02 |
| 42 | GO:0005747: mitochondrial respiratory chain complex I | 3.98E-02 |