Gene: AT5G17870
     

Gene description


TAIR ID: AT5G17870

Short description: plastid-specific 50S ribosomal protein 6

Pathogen responsiveness: 0.21

General responsiveness: 1.16

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G054896  

Wheat:

TA.28266.3.S1_X_AT  


GO biological process


translation


GO cellular component


ribosome, chloroplast


GO molecular function


rRNA binding, structural constituent of ribosome


Protein domain


No domain annotation

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


26 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.801.38E-03
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.192.02E-04
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.927.71E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-4.281.17E-10
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-1.718.36E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-1.641.18E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-1.591.66E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.471.21E-08
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.951.05E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.886.04E-07
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.841.61E-09
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.951.92E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.283.92E-04
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-2.959.60E-15
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-1.651.07E-05
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-2.192.20E-09
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-1.514.47E-05
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.134.99E-09
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.743.39E-13
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h-1.537.10E-05
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h-1.554.48E-05
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-2.202.60E-09
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-2.011.31E-07
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-1.986.73E-08
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-1.573.49E-05
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.961.04E-06






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