GO Enrichment Analysis of Co-expressed Genes with
AT5G17870
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 2 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 3 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 4 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 5 | GO:0032544: plastid translation | 4.70E-09 |
| 6 | GO:0015979: photosynthesis | 2.67E-07 |
| 7 | GO:0006412: translation | 9.42E-07 |
| 8 | GO:0009773: photosynthetic electron transport in photosystem I | 2.94E-06 |
| 9 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 5.09E-06 |
| 10 | GO:0006546: glycine catabolic process | 9.64E-06 |
| 11 | GO:0019464: glycine decarboxylation via glycine cleavage system | 9.64E-06 |
| 12 | GO:0010190: cytochrome b6f complex assembly | 2.42E-05 |
| 13 | GO:0042254: ribosome biogenesis | 3.00E-05 |
| 14 | GO:0010027: thylakoid membrane organization | 8.29E-05 |
| 15 | GO:0010207: photosystem II assembly | 2.43E-04 |
| 16 | GO:0006729: tetrahydrobiopterin biosynthetic process | 2.44E-04 |
| 17 | GO:0010114: response to red light | 2.45E-04 |
| 18 | GO:0009735: response to cytokinin | 2.85E-04 |
| 19 | GO:0090391: granum assembly | 4.05E-04 |
| 20 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 5.82E-04 |
| 21 | GO:0006986: response to unfolded protein | 5.82E-04 |
| 22 | GO:0071484: cellular response to light intensity | 5.82E-04 |
| 23 | GO:0051085: chaperone mediated protein folding requiring cofactor | 5.82E-04 |
| 24 | GO:0045727: positive regulation of translation | 7.73E-04 |
| 25 | GO:0015994: chlorophyll metabolic process | 7.73E-04 |
| 26 | GO:0010236: plastoquinone biosynthetic process | 9.77E-04 |
| 27 | GO:0006465: signal peptide processing | 9.77E-04 |
| 28 | GO:0006751: glutathione catabolic process | 1.19E-03 |
| 29 | GO:0042549: photosystem II stabilization | 1.19E-03 |
| 30 | GO:1901259: chloroplast rRNA processing | 1.43E-03 |
| 31 | GO:0010189: vitamin E biosynthetic process | 1.43E-03 |
| 32 | GO:0009955: adaxial/abaxial pattern specification | 1.43E-03 |
| 33 | GO:0048564: photosystem I assembly | 1.93E-03 |
| 34 | GO:0009658: chloroplast organization | 1.94E-03 |
| 35 | GO:0009657: plastid organization | 2.21E-03 |
| 36 | GO:0071482: cellular response to light stimulus | 2.21E-03 |
| 37 | GO:0010206: photosystem II repair | 2.49E-03 |
| 38 | GO:0006949: syncytium formation | 3.10E-03 |
| 39 | GO:0006364: rRNA processing | 3.27E-03 |
| 40 | GO:0006415: translational termination | 3.42E-03 |
| 41 | GO:0043085: positive regulation of catalytic activity | 3.42E-03 |
| 42 | GO:0000272: polysaccharide catabolic process | 3.42E-03 |
| 43 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.42E-03 |
| 44 | GO:0006869: lipid transport | 3.60E-03 |
| 45 | GO:0016024: CDP-diacylglycerol biosynthetic process | 3.75E-03 |
| 46 | GO:0032259: methylation | 3.95E-03 |
| 47 | GO:0010143: cutin biosynthetic process | 4.44E-03 |
| 48 | GO:0009768: photosynthesis, light harvesting in photosystem I | 5.95E-03 |
| 49 | GO:0016226: iron-sulfur cluster assembly | 6.76E-03 |
| 50 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 7.18E-03 |
| 51 | GO:0009561: megagametogenesis | 7.61E-03 |
| 52 | GO:0042631: cellular response to water deprivation | 8.49E-03 |
| 53 | GO:0006662: glycerol ether metabolic process | 8.95E-03 |
| 54 | GO:0006810: transport | 9.12E-03 |
| 55 | GO:0009828: plant-type cell wall loosening | 1.19E-02 |
| 56 | GO:0042128: nitrate assimilation | 1.45E-02 |
| 57 | GO:0015995: chlorophyll biosynthetic process | 1.51E-02 |
| 58 | GO:0009817: defense response to fungus, incompatible interaction | 1.62E-02 |
| 59 | GO:0018298: protein-chromophore linkage | 1.62E-02 |
| 60 | GO:0010218: response to far red light | 1.74E-02 |
| 61 | GO:0009637: response to blue light | 1.92E-02 |
| 62 | GO:0009853: photorespiration | 1.92E-02 |
| 63 | GO:0034599: cellular response to oxidative stress | 1.98E-02 |
| 64 | GO:0030001: metal ion transport | 2.11E-02 |
| 65 | GO:0009664: plant-type cell wall organization | 2.70E-02 |
| 66 | GO:0042538: hyperosmotic salinity response | 2.70E-02 |
| 67 | GO:0006486: protein glycosylation | 2.84E-02 |
| 68 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.91E-02 |
| 69 | GO:0006417: regulation of translation | 3.06E-02 |
| 70 | GO:0009409: response to cold | 3.09E-02 |
| 71 | GO:0006396: RNA processing | 3.73E-02 |
| 72 | GO:0009742: brassinosteroid mediated signaling pathway | 3.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 2 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 3 | GO:0019843: rRNA binding | 2.76E-12 |
| 4 | GO:0003735: structural constituent of ribosome | 5.39E-09 |
| 5 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 5.09E-06 |
| 6 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 9.64E-06 |
| 7 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 1.04E-04 |
| 8 | GO:0009374: biotin binding | 1.04E-04 |
| 9 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 1.04E-04 |
| 10 | GO:0031072: heat shock protein binding | 2.14E-04 |
| 11 | GO:0047746: chlorophyllase activity | 2.44E-04 |
| 12 | GO:0010297: heteropolysaccharide binding | 2.44E-04 |
| 13 | GO:0003839: gamma-glutamylcyclotransferase activity | 2.44E-04 |
| 14 | GO:0004047: aminomethyltransferase activity | 2.44E-04 |
| 15 | GO:0004751: ribose-5-phosphate isomerase activity | 4.05E-04 |
| 16 | GO:0051082: unfolded protein binding | 5.72E-04 |
| 17 | GO:0016851: magnesium chelatase activity | 5.82E-04 |
| 18 | GO:0016149: translation release factor activity, codon specific | 5.82E-04 |
| 19 | GO:0008097: 5S rRNA binding | 5.82E-04 |
| 20 | GO:0048038: quinone binding | 8.21E-04 |
| 21 | GO:0003989: acetyl-CoA carboxylase activity | 9.77E-04 |
| 22 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.19E-03 |
| 23 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.19E-03 |
| 24 | GO:0008168: methyltransferase activity | 1.85E-03 |
| 25 | GO:0003747: translation release factor activity | 2.49E-03 |
| 26 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.63E-03 |
| 27 | GO:0008047: enzyme activator activity | 3.10E-03 |
| 28 | GO:0047372: acylglycerol lipase activity | 3.42E-03 |
| 29 | GO:0008378: galactosyltransferase activity | 3.75E-03 |
| 30 | GO:0008266: poly(U) RNA binding | 4.44E-03 |
| 31 | GO:0005509: calcium ion binding | 4.51E-03 |
| 32 | GO:0031409: pigment binding | 5.18E-03 |
| 33 | GO:0005528: FK506 binding | 5.56E-03 |
| 34 | GO:0051536: iron-sulfur cluster binding | 5.56E-03 |
| 35 | GO:0051087: chaperone binding | 5.95E-03 |
| 36 | GO:0008289: lipid binding | 6.35E-03 |
| 37 | GO:0003727: single-stranded RNA binding | 7.61E-03 |
| 38 | GO:0047134: protein-disulfide reductase activity | 8.05E-03 |
| 39 | GO:0050662: coenzyme binding | 9.42E-03 |
| 40 | GO:0004791: thioredoxin-disulfide reductase activity | 9.42E-03 |
| 41 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.14E-02 |
| 42 | GO:0016791: phosphatase activity | 1.19E-02 |
| 43 | GO:0008483: transaminase activity | 1.24E-02 |
| 44 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.24E-02 |
| 45 | GO:0016168: chlorophyll binding | 1.40E-02 |
| 46 | GO:0004721: phosphoprotein phosphatase activity | 1.51E-02 |
| 47 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.57E-02 |
| 48 | GO:0004185: serine-type carboxypeptidase activity | 2.30E-02 |
| 49 | GO:0003824: catalytic activity | 2.38E-02 |
| 50 | GO:0043621: protein self-association | 2.43E-02 |
| 51 | GO:0009055: electron carrier activity | 2.44E-02 |
| 52 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.57E-02 |
| 53 | GO:0003690: double-stranded DNA binding | 2.91E-02 |
| 54 | GO:0030599: pectinesterase activity | 3.50E-02 |
| 55 | GO:0016746: transferase activity, transferring acyl groups | 3.73E-02 |
| 56 | GO:0015035: protein disulfide oxidoreductase activity | 3.73E-02 |
| 57 | GO:0016758: transferase activity, transferring hexosyl groups | 4.21E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.35E-39 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 4.34E-24 |
| 3 | GO:0009570: chloroplast stroma | 2.28E-21 |
| 4 | GO:0009579: thylakoid | 7.45E-21 |
| 5 | GO:0009941: chloroplast envelope | 6.26E-18 |
| 6 | GO:0009534: chloroplast thylakoid | 5.62E-12 |
| 7 | GO:0005840: ribosome | 7.99E-12 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 1.26E-10 |
| 9 | GO:0031977: thylakoid lumen | 1.38E-10 |
| 10 | GO:0009654: photosystem II oxygen evolving complex | 1.81E-09 |
| 11 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 7.57E-09 |
| 12 | GO:0019898: extrinsic component of membrane | 1.02E-06 |
| 13 | GO:0005960: glycine cleavage complex | 5.09E-06 |
| 14 | GO:0030095: chloroplast photosystem II | 5.95E-06 |
| 15 | GO:0005787: signal peptidase complex | 1.04E-04 |
| 16 | GO:0009547: plastid ribosome | 1.04E-04 |
| 17 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 2.44E-04 |
| 18 | GO:0010007: magnesium chelatase complex | 4.05E-04 |
| 19 | GO:0009317: acetyl-CoA carboxylase complex | 4.05E-04 |
| 20 | GO:0016020: membrane | 5.72E-04 |
| 21 | GO:0009706: chloroplast inner membrane | 5.72E-04 |
| 22 | GO:0010287: plastoglobule | 7.08E-04 |
| 23 | GO:0009522: photosystem I | 7.18E-04 |
| 24 | GO:0009539: photosystem II reaction center | 2.21E-03 |
| 25 | GO:0005763: mitochondrial small ribosomal subunit | 2.49E-03 |
| 26 | GO:0048046: apoplast | 3.38E-03 |
| 27 | GO:0000311: plastid large ribosomal subunit | 3.75E-03 |
| 28 | GO:0009508: plastid chromosome | 4.09E-03 |
| 29 | GO:0000312: plastid small ribosomal subunit | 4.44E-03 |
| 30 | GO:0030076: light-harvesting complex | 4.80E-03 |
| 31 | GO:0042651: thylakoid membrane | 5.95E-03 |
| 32 | GO:0009523: photosystem II | 9.90E-03 |
| 33 | GO:0009295: nucleoid | 1.24E-02 |
| 34 | GO:0010319: stromule | 1.24E-02 |
| 35 | GO:0015934: large ribosomal subunit | 1.80E-02 |
| 36 | GO:0009536: plastid | 2.73E-02 |
| 37 | GO:0022626: cytosolic ribosome | 3.86E-02 |