gene detail

Gene description

TAIR ID: AT5G15160

Short description: BANQUO 2

Pathogen responsiveness: -0.65

General responsiveness: 0.23

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

photomorphogenesis, regulation of transcription, DNA-templated, regulation of growth, regulation of timing of transition from vegetative to reproductive phase, transcription, gibberellic acid mediated signaling pathway

GO cellular component

vacuole, nucleus

GO molecular function

protein binding, protein dimerization activity, transcription factor activity, sequence-specific DNA binding

Protein domain

Pfam	PF00010, Helix-loop-helix DNA-binding domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G24050, AT1G24260, AT5G61850, AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

15 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-1.87	4.31E-04
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.71	6.26E-04
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-2.04	1.93E-04
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.77	3.89E-09
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-1.53	2.29E-04
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-1.64	1.04E-04
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-1.51	2.72E-04
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 EV	-1.74	1.91E-04
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.95	2.65E-11
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	-1.54	1.21E-09
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	-1.99	2.10E-06
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	1.85	3.02E-18
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.60	1.66E-14
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	2.03	2.95E-20
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	-2.01	7.70E-03