Gene: AT5G14660
     


Gene description


TAIR ID: AT5G14660

Short description: peptide deformylase 1B

Pathogen responsiveness: -0.22

General responsiveness: 1.54

Orthologous


Rice:

OS01G0637600  

Maize:

GRMZM2G179693  

Wheat: No orthologous gene

GO biological process


N-terminal protein amino acid modification, translation, peptidyl-methionine modification, co-translational protein modification


GO cellular component


chloroplast, mitochondrion, chloroplast stroma


GO molecular function


peptide deformylase activity, metal ion binding


Protein domain


PfamPF01327, Polypeptide deformylase

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


16 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, erf104 ko, water 4 hCol, erf104 ko, Flg22 4 h-2.043.09E-02
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.663.15E-06
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.042.84E-07
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.662.56E-06
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.715.59E-11
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-1.591.50E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-1.577.47E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.853.88E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.055.78E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.766.66E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.026.34E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.621.17E-13
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.921.19E-09
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-1.504.57E-03
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.546.43E-04
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.723.67E-03






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