GO Enrichment Analysis of Co-expressed Genes with
AT5G14660
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 2 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 3 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 4 | GO:0009773: photosynthetic electron transport in photosystem I | 8.16E-09 |
| 5 | GO:0015979: photosynthesis | 4.59E-08 |
| 6 | GO:0010196: nonphotochemical quenching | 2.60E-05 |
| 7 | GO:0051180: vitamin transport | 7.23E-05 |
| 8 | GO:0009443: pyridoxal 5'-phosphate salvage | 7.23E-05 |
| 9 | GO:0030974: thiamine pyrophosphate transport | 7.23E-05 |
| 10 | GO:0009735: response to cytokinin | 1.06E-04 |
| 11 | GO:0015893: drug transport | 1.74E-04 |
| 12 | GO:0010115: regulation of abscisic acid biosynthetic process | 1.74E-04 |
| 13 | GO:0006729: tetrahydrobiopterin biosynthetic process | 1.74E-04 |
| 14 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.74E-04 |
| 15 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.74E-04 |
| 16 | GO:0006000: fructose metabolic process | 2.93E-04 |
| 17 | GO:0010581: regulation of starch biosynthetic process | 2.93E-04 |
| 18 | GO:0071492: cellular response to UV-A | 2.93E-04 |
| 19 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 4.23E-04 |
| 20 | GO:0042744: hydrogen peroxide catabolic process | 4.83E-04 |
| 21 | GO:0010021: amylopectin biosynthetic process | 5.65E-04 |
| 22 | GO:0071486: cellular response to high light intensity | 5.65E-04 |
| 23 | GO:0045727: positive regulation of translation | 5.65E-04 |
| 24 | GO:0015994: chlorophyll metabolic process | 5.65E-04 |
| 25 | GO:0016120: carotene biosynthetic process | 7.14E-04 |
| 26 | GO:0080110: sporopollenin biosynthetic process | 7.14E-04 |
| 27 | GO:0006564: L-serine biosynthetic process | 7.14E-04 |
| 28 | GO:0010236: plastoquinone biosynthetic process | 7.14E-04 |
| 29 | GO:0006461: protein complex assembly | 7.14E-04 |
| 30 | GO:0010027: thylakoid membrane organization | 7.34E-04 |
| 31 | GO:0006561: proline biosynthetic process | 8.73E-04 |
| 32 | GO:0042549: photosystem II stabilization | 8.73E-04 |
| 33 | GO:0000470: maturation of LSU-rRNA | 8.73E-04 |
| 34 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.04E-03 |
| 35 | GO:0010189: vitamin E biosynthetic process | 1.04E-03 |
| 36 | GO:0009658: chloroplast organization | 1.05E-03 |
| 37 | GO:0006400: tRNA modification | 1.21E-03 |
| 38 | GO:0009395: phospholipid catabolic process | 1.21E-03 |
| 39 | GO:0009772: photosynthetic electron transport in photosystem II | 1.21E-03 |
| 40 | GO:0005978: glycogen biosynthetic process | 1.40E-03 |
| 41 | GO:0009657: plastid organization | 1.59E-03 |
| 42 | GO:0019430: removal of superoxide radicals | 1.59E-03 |
| 43 | GO:0032544: plastid translation | 1.59E-03 |
| 44 | GO:0006002: fructose 6-phosphate metabolic process | 1.59E-03 |
| 45 | GO:0000373: Group II intron splicing | 1.80E-03 |
| 46 | GO:0010380: regulation of chlorophyll biosynthetic process | 2.01E-03 |
| 47 | GO:0005982: starch metabolic process | 2.01E-03 |
| 48 | GO:0032259: methylation | 2.13E-03 |
| 49 | GO:0009688: abscisic acid biosynthetic process | 2.23E-03 |
| 50 | GO:0009073: aromatic amino acid family biosynthetic process | 2.46E-03 |
| 51 | GO:0043085: positive regulation of catalytic activity | 2.46E-03 |
| 52 | GO:0009750: response to fructose | 2.46E-03 |
| 53 | GO:0010628: positive regulation of gene expression | 2.94E-03 |
| 54 | GO:0006094: gluconeogenesis | 2.94E-03 |
| 55 | GO:0009767: photosynthetic electron transport chain | 2.94E-03 |
| 56 | GO:0005986: sucrose biosynthetic process | 2.94E-03 |
| 57 | GO:0019253: reductive pentose-phosphate cycle | 3.19E-03 |
| 58 | GO:0005985: sucrose metabolic process | 3.44E-03 |
| 59 | GO:0009695: jasmonic acid biosynthetic process | 4.26E-03 |
| 60 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.26E-03 |
| 61 | GO:0006810: transport | 4.32E-03 |
| 62 | GO:0031408: oxylipin biosynthetic process | 4.54E-03 |
| 63 | GO:0055114: oxidation-reduction process | 5.11E-03 |
| 64 | GO:0009561: megagametogenesis | 5.43E-03 |
| 65 | GO:0010584: pollen exine formation | 5.43E-03 |
| 66 | GO:0016117: carotenoid biosynthetic process | 5.74E-03 |
| 67 | GO:0000413: protein peptidyl-prolyl isomerization | 6.05E-03 |
| 68 | GO:0010182: sugar mediated signaling pathway | 6.38E-03 |
| 69 | GO:0015986: ATP synthesis coupled proton transport | 6.70E-03 |
| 70 | GO:0019252: starch biosynthetic process | 7.04E-03 |
| 71 | GO:0015995: chlorophyll biosynthetic process | 1.07E-02 |
| 72 | GO:0045454: cell redox homeostasis | 1.13E-02 |
| 73 | GO:0018298: protein-chromophore linkage | 1.15E-02 |
| 74 | GO:0010218: response to far red light | 1.23E-02 |
| 75 | GO:0009637: response to blue light | 1.36E-02 |
| 76 | GO:0006839: mitochondrial transport | 1.49E-02 |
| 77 | GO:0008152: metabolic process | 1.54E-02 |
| 78 | GO:0010114: response to red light | 1.63E-02 |
| 79 | GO:0009644: response to high light intensity | 1.72E-02 |
| 80 | GO:0006364: rRNA processing | 2.01E-02 |
| 81 | GO:0042742: defense response to bacterium | 4.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 2 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 3 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 4 | GO:0045436: lycopene beta cyclase activity | 0.00E+00 |
| 5 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 6 | GO:0019843: rRNA binding | 3.07E-05 |
| 7 | GO:0004033: aldo-keto reductase (NADP) activity | 3.42E-05 |
| 8 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 7.23E-05 |
| 9 | GO:0009496: plastoquinol--plastocyanin reductase activity | 7.23E-05 |
| 10 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 7.23E-05 |
| 11 | GO:0004321: fatty-acyl-CoA synthase activity | 7.23E-05 |
| 12 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 7.23E-05 |
| 13 | GO:0090422: thiamine pyrophosphate transporter activity | 7.23E-05 |
| 14 | GO:0018708: thiol S-methyltransferase activity | 1.74E-04 |
| 15 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 1.74E-04 |
| 16 | GO:0016630: protochlorophyllide reductase activity | 1.74E-04 |
| 17 | GO:0047746: chlorophyllase activity | 1.74E-04 |
| 18 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.74E-04 |
| 19 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.74E-04 |
| 20 | GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | 2.93E-04 |
| 21 | GO:0004751: ribose-5-phosphate isomerase activity | 2.93E-04 |
| 22 | GO:0070402: NADPH binding | 2.93E-04 |
| 23 | GO:0043169: cation binding | 2.93E-04 |
| 24 | GO:0050662: coenzyme binding | 4.49E-04 |
| 25 | GO:0016597: amino acid binding | 6.95E-04 |
| 26 | GO:0003959: NADPH dehydrogenase activity | 7.14E-04 |
| 27 | GO:0016168: chlorophyll binding | 7.74E-04 |
| 28 | GO:0008168: methyltransferase activity | 1.01E-03 |
| 29 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.76E-03 |
| 30 | GO:0016207: 4-coumarate-CoA ligase activity | 1.80E-03 |
| 31 | GO:0008047: enzyme activator activity | 2.23E-03 |
| 32 | GO:0004022: alcohol dehydrogenase (NAD) activity | 2.94E-03 |
| 33 | GO:0031072: heat shock protein binding | 2.94E-03 |
| 34 | GO:0008266: poly(U) RNA binding | 3.19E-03 |
| 35 | GO:0031409: pigment binding | 3.71E-03 |
| 36 | GO:0005528: FK506 binding | 3.98E-03 |
| 37 | GO:0043424: protein histidine kinase binding | 4.26E-03 |
| 38 | GO:0022891: substrate-specific transmembrane transporter activity | 5.13E-03 |
| 39 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 6.38E-03 |
| 40 | GO:0008080: N-acetyltransferase activity | 6.38E-03 |
| 41 | GO:0004791: thioredoxin-disulfide reductase activity | 6.70E-03 |
| 42 | GO:0004601: peroxidase activity | 7.59E-03 |
| 43 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 8.07E-03 |
| 44 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.11E-02 |
| 45 | GO:0003824: catalytic activity | 1.28E-02 |
| 46 | GO:0003746: translation elongation factor activity | 1.36E-02 |
| 47 | GO:0003993: acid phosphatase activity | 1.40E-02 |
| 48 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.49E-02 |
| 49 | GO:0016491: oxidoreductase activity | 1.61E-02 |
| 50 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.72E-02 |
| 51 | GO:0003723: RNA binding | 1.78E-02 |
| 52 | GO:0051287: NAD binding | 1.86E-02 |
| 53 | GO:0016874: ligase activity | 2.47E-02 |
| 54 | GO:0051082: unfolded protein binding | 2.58E-02 |
| 55 | GO:0003735: structural constituent of ribosome | 2.70E-02 |
| 56 | GO:0016787: hydrolase activity | 2.96E-02 |
| 57 | GO:0016740: transferase activity | 3.02E-02 |
| 58 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.09E-02 |
| 59 | GO:0030246: carbohydrate binding | 3.33E-02 |
| 60 | GO:0046872: metal ion binding | 4.53E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 9.94E-33 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 4.60E-15 |
| 3 | GO:0009534: chloroplast thylakoid | 8.83E-15 |
| 4 | GO:0009570: chloroplast stroma | 9.77E-13 |
| 5 | GO:0009941: chloroplast envelope | 1.77E-11 |
| 6 | GO:0009579: thylakoid | 4.47E-09 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 1.25E-06 |
| 8 | GO:0031977: thylakoid lumen | 4.21E-06 |
| 9 | GO:0009533: chloroplast stromal thylakoid | 2.60E-05 |
| 10 | GO:0010287: plastoglobule | 3.82E-04 |
| 11 | GO:0009523: photosystem II | 4.81E-04 |
| 12 | GO:0010319: stromule | 6.57E-04 |
| 13 | GO:0009512: cytochrome b6f complex | 7.14E-04 |
| 14 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 8.73E-04 |
| 15 | GO:0009501: amyloplast | 1.40E-03 |
| 16 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.80E-03 |
| 17 | GO:0009706: chloroplast inner membrane | 2.86E-03 |
| 18 | GO:0000312: plastid small ribosomal subunit | 3.19E-03 |
| 19 | GO:0030095: chloroplast photosystem II | 3.19E-03 |
| 20 | GO:0030076: light-harvesting complex | 3.44E-03 |
| 21 | GO:0042651: thylakoid membrane | 4.26E-03 |
| 22 | GO:0009654: photosystem II oxygen evolving complex | 4.26E-03 |
| 23 | GO:0015935: small ribosomal subunit | 4.54E-03 |
| 24 | GO:0009522: photosystem I | 6.70E-03 |
| 25 | GO:0019898: extrinsic component of membrane | 7.04E-03 |
| 26 | GO:0030529: intracellular ribonucleoprotein complex | 9.54E-03 |
| 27 | GO:0022627: cytosolic small ribosomal subunit | 4.65E-02 |
| 28 | GO:0046658: anchored component of plasma membrane | 4.65E-02 |