gene detail

Gene description

TAIR ID: AT5G14650

Short description: Pectin lyase-like superfamily protein

Pathogen responsiveness: -2.00

General responsiveness: 1.54

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

carbohydrate metabolic process, cell wall organization

GO cellular component

extracellular region

GO molecular function

lyase activity, polygalacturonase activity

Protein domain

Pfam	PF00295, Glycosyl hydrolases family 28
SMART	SM00710, PbH1

Metabolic pathway

PWY-1081: homogalacturonan degradation

KEGG pathway

PATH:ath00040: Pentose and glucuronate interconversions

Transcriptional regulation

Regulator:
AT2G20180, AT2G43010, AT2G47190

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE56094_WT_PSTDC3000 view

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26206	Col, WT, control	Col, WT, R.solani_AG2_1 7 d	2.94	2.70E-05
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	1.70	1.00E-02
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_24 h	-2.72	3.34E-04
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_24 h	-1.97	3.92E-03
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	1.51	1.35E-12