gene detail

Gene description

TAIR ID: AT5G12390

Short description: Tetratricopeptide repeat (TPR)-like superfamily protein

Pathogen responsiveness: -0.76

General responsiveness: -2.70

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

mitochondrial fission, peroxisome fission

GO cellular component

mitochondrial outer membrane, integral component of membrane, peroxisome, peroxisomal membrane, mitochondrion

GO molecular function

protein binding

Protein domain

Pfam	PF14853, Fis1 C-terminal tetratricopeptide repeat
Pfam	PF14852, Fis1 N-terminal tetratricopeptide repeat

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT2G38250, AT5G67300

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 6

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

9 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.71	4.23E-09
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.88	7.11E-13
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	1.60	9.73E-12
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	3.09	9.83E-24
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	2.03	2.33E-13
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.87	5.43E-12
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	2.79	1.01E-20
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	1.83	1.94E-11
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	1.59	1.20E-02