GO Enrichment Analysis of Co-expressed Genes with
AT5G12390
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051553: flavone biosynthetic process | 0.00E+00 |
| 2 | GO:0006654: phosphatidic acid biosynthetic process | 0.00E+00 |
| 3 | GO:0090480: purine nucleotide-sugar transmembrane transport | 0.00E+00 |
| 4 | GO:1902289: negative regulation of defense response to oomycetes | 0.00E+00 |
| 5 | GO:0005993: trehalose catabolic process | 0.00E+00 |
| 6 | GO:2000378: negative regulation of reactive oxygen species metabolic process | 0.00E+00 |
| 7 | GO:0010401: pectic galactan metabolic process | 0.00E+00 |
| 8 | GO:0080149: sucrose induced translational repression | 0.00E+00 |
| 9 | GO:0006983: ER overload response | 0.00E+00 |
| 10 | GO:1902009: positive regulation of toxin transport | 0.00E+00 |
| 11 | GO:0015031: protein transport | 1.36E-05 |
| 12 | GO:0016337: single organismal cell-cell adhesion | 1.10E-04 |
| 13 | GO:1990641: response to iron ion starvation | 1.10E-04 |
| 14 | GO:0043182: vacuolar sequestering of sodium ion | 1.10E-04 |
| 15 | GO:0080183: response to photooxidative stress | 2.57E-04 |
| 16 | GO:0080151: positive regulation of salicylic acid mediated signaling pathway | 2.57E-04 |
| 17 | GO:0006024: glycosaminoglycan biosynthetic process | 2.57E-04 |
| 18 | GO:0052541: plant-type cell wall cellulose metabolic process | 2.57E-04 |
| 19 | GO:0006101: citrate metabolic process | 2.57E-04 |
| 20 | GO:0043066: negative regulation of apoptotic process | 2.57E-04 |
| 21 | GO:0015012: heparan sulfate proteoglycan biosynthetic process | 2.57E-04 |
| 22 | GO:0051707: response to other organism | 2.70E-04 |
| 23 | GO:0015783: GDP-fucose transport | 4.25E-04 |
| 24 | GO:0009410: response to xenobiotic stimulus | 4.25E-04 |
| 25 | GO:0080163: regulation of protein serine/threonine phosphatase activity | 4.25E-04 |
| 26 | GO:0055070: copper ion homeostasis | 6.10E-04 |
| 27 | GO:0001676: long-chain fatty acid metabolic process | 6.10E-04 |
| 28 | GO:0002239: response to oomycetes | 6.10E-04 |
| 29 | GO:0071323: cellular response to chitin | 6.10E-04 |
| 30 | GO:0006621: protein retention in ER lumen | 8.10E-04 |
| 31 | GO:1901002: positive regulation of response to salt stress | 8.10E-04 |
| 32 | GO:0006623: protein targeting to vacuole | 8.23E-04 |
| 33 | GO:0097428: protein maturation by iron-sulfur cluster transfer | 1.02E-03 |
| 34 | GO:0006097: glyoxylate cycle | 1.02E-03 |
| 35 | GO:0009229: thiamine diphosphate biosynthetic process | 1.02E-03 |
| 36 | GO:0006665: sphingolipid metabolic process | 1.02E-03 |
| 37 | GO:0006014: D-ribose metabolic process | 1.25E-03 |
| 38 | GO:0009228: thiamine biosynthetic process | 1.25E-03 |
| 39 | GO:0047484: regulation of response to osmotic stress | 1.25E-03 |
| 40 | GO:1900425: negative regulation of defense response to bacterium | 1.25E-03 |
| 41 | GO:0017148: negative regulation of translation | 1.49E-03 |
| 42 | GO:0010044: response to aluminum ion | 1.75E-03 |
| 43 | GO:0006333: chromatin assembly or disassembly | 1.75E-03 |
| 44 | GO:0045010: actin nucleation | 2.03E-03 |
| 45 | GO:0031540: regulation of anthocyanin biosynthetic process | 2.03E-03 |
| 46 | GO:0006102: isocitrate metabolic process | 2.03E-03 |
| 47 | GO:0007155: cell adhesion | 2.03E-03 |
| 48 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 2.03E-03 |
| 49 | GO:0006605: protein targeting | 2.03E-03 |
| 50 | GO:0006631: fatty acid metabolic process | 2.41E-03 |
| 51 | GO:0000902: cell morphogenesis | 2.62E-03 |
| 52 | GO:0015780: nucleotide-sugar transport | 2.62E-03 |
| 53 | GO:0007338: single fertilization | 2.62E-03 |
| 54 | GO:0008202: steroid metabolic process | 2.93E-03 |
| 55 | GO:0009086: methionine biosynthetic process | 2.93E-03 |
| 56 | GO:0016192: vesicle-mediated transport | 2.98E-03 |
| 57 | GO:0043069: negative regulation of programmed cell death | 3.25E-03 |
| 58 | GO:0051555: flavonol biosynthetic process | 3.25E-03 |
| 59 | GO:0000038: very long-chain fatty acid metabolic process | 3.59E-03 |
| 60 | GO:0019684: photosynthesis, light reaction | 3.59E-03 |
| 61 | GO:2000012: regulation of auxin polar transport | 4.30E-03 |
| 62 | GO:0009620: response to fungus | 4.55E-03 |
| 63 | GO:0002237: response to molecule of bacterial origin | 4.66E-03 |
| 64 | GO:0007015: actin filament organization | 4.66E-03 |
| 65 | GO:0000162: tryptophan biosynthetic process | 5.44E-03 |
| 66 | GO:0006979: response to oxidative stress | 5.76E-03 |
| 67 | GO:0009863: salicylic acid mediated signaling pathway | 5.84E-03 |
| 68 | GO:0030150: protein import into mitochondrial matrix | 5.84E-03 |
| 69 | GO:0006289: nucleotide-excision repair | 5.84E-03 |
| 70 | GO:0006334: nucleosome assembly | 6.67E-03 |
| 71 | GO:0031348: negative regulation of defense response | 7.11E-03 |
| 72 | GO:0009814: defense response, incompatible interaction | 7.11E-03 |
| 73 | GO:0010087: phloem or xylem histogenesis | 8.93E-03 |
| 74 | GO:0019252: starch biosynthetic process | 1.04E-02 |
| 75 | GO:0002229: defense response to oomycetes | 1.09E-02 |
| 76 | GO:0010193: response to ozone | 1.09E-02 |
| 77 | GO:0009567: double fertilization forming a zygote and endosperm | 1.25E-02 |
| 78 | GO:0009816: defense response to bacterium, incompatible interaction | 1.47E-02 |
| 79 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.59E-02 |
| 80 | GO:0008219: cell death | 1.71E-02 |
| 81 | GO:0009813: flavonoid biosynthetic process | 1.77E-02 |
| 82 | GO:0000724: double-strand break repair via homologous recombination | 1.96E-02 |
| 83 | GO:0045087: innate immune response | 2.02E-02 |
| 84 | GO:0006886: intracellular protein transport | 2.05E-02 |
| 85 | GO:0006099: tricarboxylic acid cycle | 2.09E-02 |
| 86 | GO:0009751: response to salicylic acid | 2.41E-02 |
| 87 | GO:0010114: response to red light | 2.42E-02 |
| 88 | GO:0009744: response to sucrose | 2.42E-02 |
| 89 | GO:0006629: lipid metabolic process | 2.45E-02 |
| 90 | GO:0009408: response to heat | 2.45E-02 |
| 91 | GO:0008643: carbohydrate transport | 2.56E-02 |
| 92 | GO:0009636: response to toxic substance | 2.63E-02 |
| 93 | GO:0008152: metabolic process | 2.70E-02 |
| 94 | GO:0009809: lignin biosynthetic process | 2.99E-02 |
| 95 | GO:0006486: protein glycosylation | 2.99E-02 |
| 96 | GO:0006508: proteolysis | 3.06E-02 |
| 97 | GO:0010224: response to UV-B | 3.07E-02 |
| 98 | GO:0046686: response to cadmium ion | 4.01E-02 |
| 99 | GO:0000398: mRNA splicing, via spliceosome | 4.26E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034338: short-chain carboxylesterase activity | 0.00E+00 |
| 2 | GO:0033759: flavone synthase activity | 0.00E+00 |
| 3 | GO:0004555: alpha,alpha-trehalase activity | 0.00E+00 |
| 4 | GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity | 0.00E+00 |
| 5 | GO:0050334: thiaminase activity | 0.00E+00 |
| 6 | GO:0005046: KDEL sequence binding | 0.00E+00 |
| 7 | GO:0061133: endopeptidase activator activity | 0.00E+00 |
| 8 | GO:0035251: UDP-glucosyltransferase activity | 1.66E-05 |
| 9 | GO:0047893: flavonol 3-O-glucosyltransferase activity | 6.58E-05 |
| 10 | GO:0016920: pyroglutamyl-peptidase activity | 1.10E-04 |
| 11 | GO:0015927: trehalase activity | 1.10E-04 |
| 12 | GO:0047150: betaine-homocysteine S-methyltransferase activity | 1.10E-04 |
| 13 | GO:0003994: aconitate hydratase activity | 2.57E-04 |
| 14 | GO:0032934: sterol binding | 2.57E-04 |
| 15 | GO:0050736: O-malonyltransferase activity | 2.57E-04 |
| 16 | GO:0005457: GDP-fucose transmembrane transporter activity | 4.25E-04 |
| 17 | GO:0035529: NADH pyrophosphatase activity | 6.10E-04 |
| 18 | GO:0030527: structural constituent of chromatin | 6.10E-04 |
| 19 | GO:0004834: tryptophan synthase activity | 8.10E-04 |
| 20 | GO:0046923: ER retention sequence binding | 8.10E-04 |
| 21 | GO:0070628: proteasome binding | 8.10E-04 |
| 22 | GO:0047631: ADP-ribose diphosphatase activity | 1.02E-03 |
| 23 | GO:0004623: phospholipase A2 activity | 1.02E-03 |
| 24 | GO:0000210: NAD+ diphosphatase activity | 1.25E-03 |
| 25 | GO:0004806: triglyceride lipase activity | 1.46E-03 |
| 26 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.49E-03 |
| 27 | GO:0102391: decanoate--CoA ligase activity | 1.49E-03 |
| 28 | GO:0004747: ribokinase activity | 1.49E-03 |
| 29 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.75E-03 |
| 30 | GO:0102425: myricetin 3-O-glucosyltransferase activity | 1.75E-03 |
| 31 | GO:0102360: daphnetin 3-O-glucosyltransferase activity | 1.75E-03 |
| 32 | GO:0008320: protein transmembrane transporter activity | 1.75E-03 |
| 33 | GO:0008865: fructokinase activity | 2.03E-03 |
| 34 | GO:0052747: sinapyl alcohol dehydrogenase activity | 2.03E-03 |
| 35 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.04E-03 |
| 36 | GO:0003682: chromatin binding | 2.28E-03 |
| 37 | GO:0008142: oxysterol binding | 2.32E-03 |
| 38 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 2.62E-03 |
| 39 | GO:0004864: protein phosphatase inhibitor activity | 3.25E-03 |
| 40 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 3.93E-03 |
| 41 | GO:0031072: heat shock protein binding | 4.30E-03 |
| 42 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 4.55E-03 |
| 43 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 4.55E-03 |
| 44 | GO:0008061: chitin binding | 5.04E-03 |
| 45 | GO:0003712: transcription cofactor activity | 5.04E-03 |
| 46 | GO:0004725: protein tyrosine phosphatase activity | 5.44E-03 |
| 47 | GO:0051536: iron-sulfur cluster binding | 5.84E-03 |
| 48 | GO:0031418: L-ascorbic acid binding | 5.84E-03 |
| 49 | GO:0043130: ubiquitin binding | 5.84E-03 |
| 50 | GO:0016758: transferase activity, transferring hexosyl groups | 6.06E-03 |
| 51 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 6.40E-03 |
| 52 | GO:0005102: receptor binding | 8.46E-03 |
| 53 | GO:0008194: UDP-glycosyltransferase activity | 9.62E-03 |
| 54 | GO:0004872: receptor activity | 1.04E-02 |
| 55 | GO:0030247: polysaccharide binding | 1.59E-02 |
| 56 | GO:0016787: hydrolase activity | 1.80E-02 |
| 57 | GO:0042803: protein homodimerization activity | 2.08E-02 |
| 58 | GO:0005509: calcium ion binding | 2.09E-02 |
| 59 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.22E-02 |
| 60 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.56E-02 |
| 61 | GO:0005198: structural molecule activity | 2.63E-02 |
| 62 | GO:0051287: NAD binding | 2.77E-02 |
| 63 | GO:0046872: metal ion binding | 3.28E-02 |
| 64 | GO:0022857: transmembrane transporter activity | 3.69E-02 |
| 65 | GO:0051082: unfolded protein binding | 3.85E-02 |
| 66 | GO:0015035: protein disulfide oxidoreductase activity | 3.93E-02 |
| 67 | GO:0016829: lyase activity | 4.77E-02 |
| 68 | GO:0030170: pyridoxal phosphate binding | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005801: cis-Golgi network | 3.74E-05 |
| 2 | GO:0030665: clathrin-coated vesicle membrane | 1.24E-04 |
| 3 | GO:0017119: Golgi transport complex | 1.48E-04 |
| 4 | GO:0005789: endoplasmic reticulum membrane | 1.56E-04 |
| 5 | GO:0030134: ER to Golgi transport vesicle | 2.57E-04 |
| 6 | GO:0000139: Golgi membrane | 5.55E-04 |
| 7 | GO:0030658: transport vesicle membrane | 6.10E-04 |
| 8 | GO:0000164: protein phosphatase type 1 complex | 1.02E-03 |
| 9 | GO:0005885: Arp2/3 protein complex | 1.49E-03 |
| 10 | GO:0005794: Golgi apparatus | 2.22E-03 |
| 11 | GO:0031902: late endosome membrane | 2.41E-03 |
| 12 | GO:0008541: proteasome regulatory particle, lid subcomplex | 3.59E-03 |
| 13 | GO:0005623: cell | 6.40E-03 |
| 14 | GO:0016021: integral component of membrane | 7.42E-03 |
| 15 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 8.00E-03 |
| 16 | GO:0019898: extrinsic component of membrane | 1.04E-02 |
| 17 | GO:0000785: chromatin | 1.14E-02 |
| 18 | GO:0005783: endoplasmic reticulum | 1.39E-02 |
| 19 | GO:0031225: anchored component of membrane | 1.67E-02 |
| 20 | GO:0005802: trans-Golgi network | 1.72E-02 |
| 21 | GO:0000325: plant-type vacuole | 1.89E-02 |
| 22 | GO:0005737: cytoplasm | 1.97E-02 |
| 23 | GO:0005768: endosome | 2.03E-02 |
| 24 | GO:0005743: mitochondrial inner membrane | 2.28E-02 |
| 25 | GO:0005829: cytosol | 2.47E-02 |
| 26 | GO:0043231: intracellular membrane-bounded organelle | 2.70E-02 |
| 27 | GO:0005635: nuclear envelope | 3.14E-02 |
| 28 | GO:0005887: integral component of plasma membrane | 3.32E-02 |
| 29 | GO:0005681: spliceosomal complex | 3.37E-02 |
| 30 | GO:0016607: nuclear speck | 3.45E-02 |
| 31 | GO:0009543: chloroplast thylakoid lumen | 4.51E-02 |