Gene: AT5G12210
     

Gene description


TAIR ID: AT5G12210

Short description: RAB geranylgeranyl transferase beta subunit 1

Pathogen responsiveness: -1.84

General responsiveness: -2.02

Orthologous


Rice:

OS08G0512300   OS01G0737800  

Maize:

GRMZM2G124557  

Wheat: No orthologous gene

GO biological process


protein geranylgeranylation, pollen development, root development


GO cellular component


cytosol, Rab-protein geranylgeranyltransferase complex


GO molecular function


Rab geranylgeranyltransferase activity, metal ion binding


Protein domain


PfamPF00432, Prenyltransferase and squalene oxidase repeat

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G36990

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.742.40E-10
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.741.96E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.942.76E-11
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.181.75E-12






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