GO Enrichment Analysis of Co-expressed Genes with
AT5G12210
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043201: response to leucine | 0.00E+00 |
| 2 | GO:0080052: response to histidine | 0.00E+00 |
| 3 | GO:0048227: plasma membrane to endosome transport | 0.00E+00 |
| 4 | GO:0080053: response to phenylalanine | 0.00E+00 |
| 5 | GO:0006983: ER overload response | 0.00E+00 |
| 6 | GO:0010499: proteasomal ubiquitin-independent protein catabolic process | 0.00E+00 |
| 7 | GO:0051553: flavone biosynthetic process | 0.00E+00 |
| 8 | GO:0033542: fatty acid beta-oxidation, unsaturated, even number | 0.00E+00 |
| 9 | GO:0043069: negative regulation of programmed cell death | 4.96E-08 |
| 10 | GO:0006212: uracil catabolic process | 1.05E-06 |
| 11 | GO:0019483: beta-alanine biosynthetic process | 1.05E-06 |
| 12 | GO:0043562: cellular response to nitrogen levels | 1.27E-04 |
| 13 | GO:0042742: defense response to bacterium | 1.44E-04 |
| 14 | GO:0071586: CAAX-box protein processing | 1.46E-04 |
| 15 | GO:0051245: negative regulation of cellular defense response | 1.46E-04 |
| 16 | GO:0006422: aspartyl-tRNA aminoacylation | 1.46E-04 |
| 17 | GO:0006481: C-terminal protein methylation | 1.46E-04 |
| 18 | GO:0010941: regulation of cell death | 1.46E-04 |
| 19 | GO:0035344: hypoxanthine transport | 1.46E-04 |
| 20 | GO:0010265: SCF complex assembly | 1.46E-04 |
| 21 | GO:0098721: uracil import across plasma membrane | 1.46E-04 |
| 22 | GO:0098702: adenine import across plasma membrane | 1.46E-04 |
| 23 | GO:0080120: CAAX-box protein maturation | 1.46E-04 |
| 24 | GO:0098710: guanine import across plasma membrane | 1.46E-04 |
| 25 | GO:0006508: proteolysis | 1.53E-04 |
| 26 | GO:0009821: alkaloid biosynthetic process | 1.56E-04 |
| 27 | GO:0009751: response to salicylic acid | 2.66E-04 |
| 28 | GO:0000266: mitochondrial fission | 2.99E-04 |
| 29 | GO:0043066: negative regulation of apoptotic process | 3.33E-04 |
| 30 | GO:0042939: tripeptide transport | 3.33E-04 |
| 31 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 3.33E-04 |
| 32 | GO:0019441: tryptophan catabolic process to kynurenine | 3.33E-04 |
| 33 | GO:0002221: pattern recognition receptor signaling pathway | 3.33E-04 |
| 34 | GO:0048281: inflorescence morphogenesis | 5.47E-04 |
| 35 | GO:0008333: endosome to lysosome transport | 5.47E-04 |
| 36 | GO:0006468: protein phosphorylation | 6.59E-04 |
| 37 | GO:0002239: response to oomycetes | 7.83E-04 |
| 38 | GO:0006612: protein targeting to membrane | 7.83E-04 |
| 39 | GO:0048194: Golgi vesicle budding | 7.83E-04 |
| 40 | GO:0009620: response to fungus | 9.03E-04 |
| 41 | GO:0033320: UDP-D-xylose biosynthetic process | 1.04E-03 |
| 42 | GO:0010363: regulation of plant-type hypersensitive response | 1.04E-03 |
| 43 | GO:0080142: regulation of salicylic acid biosynthetic process | 1.04E-03 |
| 44 | GO:0042938: dipeptide transport | 1.04E-03 |
| 45 | GO:0060548: negative regulation of cell death | 1.04E-03 |
| 46 | GO:0061025: membrane fusion | 1.11E-03 |
| 47 | GO:0002229: defense response to oomycetes | 1.27E-03 |
| 48 | GO:0030308: negative regulation of cell growth | 1.31E-03 |
| 49 | GO:0007029: endoplasmic reticulum organization | 1.31E-03 |
| 50 | GO:0042732: D-xylose metabolic process | 1.61E-03 |
| 51 | GO:1900425: negative regulation of defense response to bacterium | 1.61E-03 |
| 52 | GO:0009753: response to jasmonic acid | 1.64E-03 |
| 53 | GO:0050832: defense response to fungus | 1.75E-03 |
| 54 | GO:0009615: response to virus | 1.81E-03 |
| 55 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 1.93E-03 |
| 56 | GO:0000911: cytokinesis by cell plate formation | 1.93E-03 |
| 57 | GO:0009612: response to mechanical stimulus | 1.93E-03 |
| 58 | GO:0010150: leaf senescence | 2.00E-03 |
| 59 | GO:0043090: amino acid import | 2.27E-03 |
| 60 | GO:0050790: regulation of catalytic activity | 2.27E-03 |
| 61 | GO:0009813: flavonoid biosynthetic process | 2.47E-03 |
| 62 | GO:0009617: response to bacterium | 2.50E-03 |
| 63 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 2.63E-03 |
| 64 | GO:0009819: drought recovery | 2.63E-03 |
| 65 | GO:1900150: regulation of defense response to fungus | 2.63E-03 |
| 66 | GO:0016559: peroxisome fission | 2.63E-03 |
| 67 | GO:0009867: jasmonic acid mediated signaling pathway | 2.98E-03 |
| 68 | GO:0009699: phenylpropanoid biosynthetic process | 3.00E-03 |
| 69 | GO:0006002: fructose 6-phosphate metabolic process | 3.00E-03 |
| 70 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 3.00E-03 |
| 71 | GO:0009738: abscisic acid-activated signaling pathway | 3.35E-03 |
| 72 | GO:0007338: single fertilization | 3.40E-03 |
| 73 | GO:0008202: steroid metabolic process | 3.81E-03 |
| 74 | GO:0006995: cellular response to nitrogen starvation | 4.23E-03 |
| 75 | GO:0000038: very long-chain fatty acid metabolic process | 4.67E-03 |
| 76 | GO:0030148: sphingolipid biosynthetic process | 4.67E-03 |
| 77 | GO:0006807: nitrogen compound metabolic process | 5.60E-03 |
| 78 | GO:0006886: intracellular protein transport | 5.97E-03 |
| 79 | GO:0002237: response to molecule of bacterial origin | 6.09E-03 |
| 80 | GO:0048367: shoot system development | 6.28E-03 |
| 81 | GO:0009225: nucleotide-sugar metabolic process | 6.59E-03 |
| 82 | GO:0070588: calcium ion transmembrane transport | 6.59E-03 |
| 83 | GO:0010053: root epidermal cell differentiation | 6.59E-03 |
| 84 | GO:0000027: ribosomal large subunit assembly | 7.63E-03 |
| 85 | GO:0009863: salicylic acid mediated signaling pathway | 7.63E-03 |
| 86 | GO:2000377: regulation of reactive oxygen species metabolic process | 7.63E-03 |
| 87 | GO:0006487: protein N-linked glycosylation | 7.63E-03 |
| 88 | GO:0006874: cellular calcium ion homeostasis | 8.18E-03 |
| 89 | GO:0048278: vesicle docking | 8.73E-03 |
| 90 | GO:0030433: ubiquitin-dependent ERAD pathway | 9.30E-03 |
| 91 | GO:0031348: negative regulation of defense response | 9.30E-03 |
| 92 | GO:0009058: biosynthetic process | 9.67E-03 |
| 93 | GO:0006012: galactose metabolic process | 9.89E-03 |
| 94 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.11E-02 |
| 95 | GO:0042147: retrograde transport, endosome to Golgi | 1.11E-02 |
| 96 | GO:0000413: protein peptidyl-prolyl isomerization | 1.17E-02 |
| 97 | GO:0010087: phloem or xylem histogenesis | 1.17E-02 |
| 98 | GO:0008360: regulation of cell shape | 1.24E-02 |
| 99 | GO:0042752: regulation of circadian rhythm | 1.30E-02 |
| 100 | GO:0006623: protein targeting to vacuole | 1.37E-02 |
| 101 | GO:0007166: cell surface receptor signaling pathway | 1.45E-02 |
| 102 | GO:0015031: protein transport | 1.47E-02 |
| 103 | GO:0007264: small GTPase mediated signal transduction | 1.50E-02 |
| 104 | GO:0030163: protein catabolic process | 1.57E-02 |
| 105 | GO:0009567: double fertilization forming a zygote and endosperm | 1.64E-02 |
| 106 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 1.94E-02 |
| 107 | GO:0006906: vesicle fusion | 2.01E-02 |
| 108 | GO:0009627: systemic acquired resistance | 2.01E-02 |
| 109 | GO:0006950: response to stress | 2.09E-02 |
| 110 | GO:0016049: cell growth | 2.17E-02 |
| 111 | GO:0007049: cell cycle | 2.20E-02 |
| 112 | GO:0008219: cell death | 2.25E-02 |
| 113 | GO:0009723: response to ethylene | 2.28E-02 |
| 114 | GO:0006499: N-terminal protein myristoylation | 2.41E-02 |
| 115 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.53E-02 |
| 116 | GO:0016192: vesicle-mediated transport | 2.57E-02 |
| 117 | GO:0006865: amino acid transport | 2.58E-02 |
| 118 | GO:0046777: protein autophosphorylation | 2.61E-02 |
| 119 | GO:0044550: secondary metabolite biosynthetic process | 2.65E-02 |
| 120 | GO:0055114: oxidation-reduction process | 2.66E-02 |
| 121 | GO:0006099: tricarboxylic acid cycle | 2.75E-02 |
| 122 | GO:0006887: exocytosis | 3.01E-02 |
| 123 | GO:0007165: signal transduction | 3.07E-02 |
| 124 | GO:0042542: response to hydrogen peroxide | 3.10E-02 |
| 125 | GO:0009737: response to abscisic acid | 3.17E-02 |
| 126 | GO:0051707: response to other organism | 3.19E-02 |
| 127 | GO:0031347: regulation of defense response | 3.65E-02 |
| 128 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 3.65E-02 |
| 129 | GO:0042538: hyperosmotic salinity response | 3.75E-02 |
| 130 | GO:0009809: lignin biosynthetic process | 3.94E-02 |
| 131 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.04E-02 |
| 132 | GO:0006857: oligopeptide transport | 4.14E-02 |
| 133 | GO:0006096: glycolytic process | 4.44E-02 |
| 134 | GO:0009873: ethylene-activated signaling pathway | 4.63E-02 |
| 135 | GO:0016569: covalent chromatin modification | 4.85E-02 |
| 136 | GO:0009553: embryo sac development | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015370: solute:sodium symporter activity | 0.00E+00 |
| 2 | GO:0050269: coniferyl-aldehyde dehydrogenase activity | 0.00E+00 |
| 3 | GO:0003837: beta-ureidopropionase activity | 0.00E+00 |
| 4 | GO:0070577: lysine-acetylated histone binding | 0.00E+00 |
| 5 | GO:0004157: dihydropyrimidinase activity | 0.00E+00 |
| 6 | GO:0016504: peptidase activator activity | 0.00E+00 |
| 7 | GO:0033759: flavone synthase activity | 0.00E+00 |
| 8 | GO:0004815: aspartate-tRNA ligase activity | 1.46E-04 |
| 9 | GO:0015208: guanine transmembrane transporter activity | 1.46E-04 |
| 10 | GO:0015294: solute:cation symporter activity | 1.46E-04 |
| 11 | GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity | 1.46E-04 |
| 12 | GO:0015207: adenine transmembrane transporter activity | 1.46E-04 |
| 13 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 1.46E-04 |
| 14 | GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity | 1.46E-04 |
| 15 | GO:0016844: strictosidine synthase activity | 1.88E-04 |
| 16 | GO:0032934: sterol binding | 3.33E-04 |
| 17 | GO:0045140: inositol phosphoceramide synthase activity | 3.33E-04 |
| 18 | GO:0004061: arylformamidase activity | 3.33E-04 |
| 19 | GO:0042937: tripeptide transporter activity | 3.33E-04 |
| 20 | GO:0004566: beta-glucuronidase activity | 3.33E-04 |
| 21 | GO:0004190: aspartic-type endopeptidase activity | 4.32E-04 |
| 22 | GO:0008430: selenium binding | 5.47E-04 |
| 23 | GO:0005093: Rab GDP-dissociation inhibitor activity | 5.47E-04 |
| 24 | GO:0033612: receptor serine/threonine kinase binding | 6.43E-04 |
| 25 | GO:0042936: dipeptide transporter activity | 1.04E-03 |
| 26 | GO:0015210: uracil transmembrane transporter activity | 1.04E-03 |
| 27 | GO:0070628: proteasome binding | 1.04E-03 |
| 28 | GO:0015204: urea transmembrane transporter activity | 1.04E-03 |
| 29 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.31E-03 |
| 30 | GO:0004040: amidase activity | 1.31E-03 |
| 31 | GO:0005496: steroid binding | 1.31E-03 |
| 32 | GO:0045431: flavonol synthase activity | 1.31E-03 |
| 33 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 1.61E-03 |
| 34 | GO:0048040: UDP-glucuronate decarboxylase activity | 1.61E-03 |
| 35 | GO:0070403: NAD+ binding | 1.93E-03 |
| 36 | GO:0004012: phospholipid-translocating ATPase activity | 1.93E-03 |
| 37 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.93E-03 |
| 38 | GO:0004683: calmodulin-dependent protein kinase activity | 2.13E-03 |
| 39 | GO:0016301: kinase activity | 2.24E-03 |
| 40 | GO:0003872: 6-phosphofructokinase activity | 2.27E-03 |
| 41 | GO:0004034: aldose 1-epimerase activity | 2.63E-03 |
| 42 | GO:0052747: sinapyl alcohol dehydrogenase activity | 2.63E-03 |
| 43 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 2.63E-03 |
| 44 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.98E-03 |
| 45 | GO:0008142: oxysterol binding | 3.00E-03 |
| 46 | GO:0003843: 1,3-beta-D-glucan synthase activity | 3.00E-03 |
| 47 | GO:0071949: FAD binding | 3.40E-03 |
| 48 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 3.81E-03 |
| 49 | GO:0005484: SNAP receptor activity | 3.83E-03 |
| 50 | GO:0004713: protein tyrosine kinase activity | 4.23E-03 |
| 51 | GO:0015293: symporter activity | 4.30E-03 |
| 52 | GO:0005543: phospholipid binding | 4.67E-03 |
| 53 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 5.13E-03 |
| 54 | GO:0004672: protein kinase activity | 5.20E-03 |
| 55 | GO:0004674: protein serine/threonine kinase activity | 5.27E-03 |
| 56 | GO:0005388: calcium-transporting ATPase activity | 5.60E-03 |
| 57 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 5.60E-03 |
| 58 | GO:0031625: ubiquitin protein ligase binding | 5.70E-03 |
| 59 | GO:0008234: cysteine-type peptidase activity | 5.70E-03 |
| 60 | GO:0004175: endopeptidase activity | 6.09E-03 |
| 61 | GO:0005516: calmodulin binding | 6.55E-03 |
| 62 | GO:0005217: intracellular ligand-gated ion channel activity | 6.59E-03 |
| 63 | GO:0003712: transcription cofactor activity | 6.59E-03 |
| 64 | GO:0004970: ionotropic glutamate receptor activity | 6.59E-03 |
| 65 | GO:0022857: transmembrane transporter activity | 6.89E-03 |
| 66 | GO:0003954: NADH dehydrogenase activity | 7.63E-03 |
| 67 | GO:0031418: L-ascorbic acid binding | 7.63E-03 |
| 68 | GO:0005524: ATP binding | 7.83E-03 |
| 69 | GO:0004707: MAP kinase activity | 8.73E-03 |
| 70 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.18E-02 |
| 71 | GO:0016853: isomerase activity | 1.30E-02 |
| 72 | GO:0010181: FMN binding | 1.30E-02 |
| 73 | GO:0004197: cysteine-type endopeptidase activity | 1.50E-02 |
| 74 | GO:0016491: oxidoreductase activity | 1.55E-02 |
| 75 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 2.01E-02 |
| 76 | GO:0004004: ATP-dependent RNA helicase activity | 2.09E-02 |
| 77 | GO:0005096: GTPase activator activity | 2.33E-02 |
| 78 | GO:0004222: metalloendopeptidase activity | 2.41E-02 |
| 79 | GO:0061630: ubiquitin protein ligase activity | 2.57E-02 |
| 80 | GO:0003697: single-stranded DNA binding | 2.66E-02 |
| 81 | GO:0000149: SNARE binding | 2.83E-02 |
| 82 | GO:0042393: histone binding | 2.92E-02 |
| 83 | GO:0004364: glutathione transferase activity | 3.10E-02 |
| 84 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 3.16E-02 |
| 85 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.56E-02 |
| 86 | GO:0005506: iron ion binding | 3.68E-02 |
| 87 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.94E-02 |
| 88 | GO:0046872: metal ion binding | 4.11E-02 |
| 89 | GO:0015171: amino acid transmembrane transporter activity | 4.24E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005886: plasma membrane | 2.70E-08 |
| 2 | GO:0005783: endoplasmic reticulum | 7.56E-06 |
| 3 | GO:0016021: integral component of membrane | 1.63E-05 |
| 4 | GO:0005794: Golgi apparatus | 4.32E-05 |
| 5 | GO:0045252: oxoglutarate dehydrogenase complex | 1.46E-04 |
| 6 | GO:0031304: intrinsic component of mitochondrial inner membrane | 3.33E-04 |
| 7 | GO:0009506: plasmodesma | 4.15E-04 |
| 8 | GO:0005773: vacuole | 7.08E-04 |
| 9 | GO:0030658: transport vesicle membrane | 7.83E-04 |
| 10 | GO:0031461: cullin-RING ubiquitin ligase complex | 7.83E-04 |
| 11 | GO:0009504: cell plate | 1.19E-03 |
| 12 | GO:0005945: 6-phosphofructokinase complex | 1.31E-03 |
| 13 | GO:0008250: oligosaccharyltransferase complex | 1.31E-03 |
| 14 | GO:0005789: endoplasmic reticulum membrane | 1.53E-03 |
| 15 | GO:0030904: retromer complex | 1.61E-03 |
| 16 | GO:0005771: multivesicular body | 1.61E-03 |
| 17 | GO:0005802: trans-Golgi network | 1.76E-03 |
| 18 | GO:0000794: condensed nuclear chromosome | 2.27E-03 |
| 19 | GO:0000148: 1,3-beta-D-glucan synthase complex | 3.00E-03 |
| 20 | GO:0017119: Golgi transport complex | 4.23E-03 |
| 21 | GO:0005765: lysosomal membrane | 4.67E-03 |
| 22 | GO:0005764: lysosome | 6.09E-03 |
| 23 | GO:0010008: endosome membrane | 6.28E-03 |
| 24 | GO:0030176: integral component of endoplasmic reticulum membrane | 6.59E-03 |
| 25 | GO:0016020: membrane | 6.93E-03 |
| 26 | GO:0043234: protein complex | 7.10E-03 |
| 27 | GO:0012505: endomembrane system | 7.11E-03 |
| 28 | GO:0005839: proteasome core complex | 8.73E-03 |
| 29 | GO:0005741: mitochondrial outer membrane | 8.73E-03 |
| 30 | GO:0005768: endosome | 8.74E-03 |
| 31 | GO:0005829: cytosol | 9.57E-03 |
| 32 | GO:0009524: phragmoplast | 9.67E-03 |
| 33 | GO:0005887: integral component of plasma membrane | 1.10E-02 |
| 34 | GO:0005778: peroxisomal membrane | 1.72E-02 |
| 35 | GO:0005777: peroxisome | 1.85E-02 |
| 36 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.16E-02 |
| 37 | GO:0000151: ubiquitin ligase complex | 2.25E-02 |
| 38 | GO:0005819: spindle | 2.83E-02 |
| 39 | GO:0031201: SNARE complex | 3.01E-02 |
| 40 | GO:0031902: late endosome membrane | 3.01E-02 |
| 41 | GO:0043231: intracellular membrane-bounded organelle | 3.96E-02 |
| 42 | GO:0005635: nuclear envelope | 4.14E-02 |
| 43 | GO:0009505: plant-type cell wall | 4.94E-02 |