Gene: AT5G11060
     

Gene description


TAIR ID: AT5G11060

Short description: KNOTTED1-like homeobox gene 4

Pathogen responsiveness: -1.26

General responsiveness: 1.15

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, response to light stimulus


GO cellular component


cytoplasm, nucleus, cytosol


GO molecular function


transcription factor activity, sequence-specific DNA binding, DNA binding


Protein domain


PfamPF03790, KNOX1 domain
PfamPF03789, ELK domain
PfamPF05920, Homeobox KN domain
PfamPF03791, KNOX2 domain
SMARTSM01188, ELK
SMARTSM00389, HOX
SMARTSM01255, KNOX1
SMARTSM01256, KNOX2

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT5G11260, AT1G24260, AT2G43010, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 11 (Top20%)

click to view PPI network

Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Flg22 1 h-1.802.06E-04
GSE17464Penta, controlPenta, Flg22 2 h-2.255.31E-06
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.992.40E-03
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.612.05E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.591.58E-08






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