gene detail

Gene description

TAIR ID: AT5G10250

Short description: Phototropic-responsive NPH3 family protein

Pathogen responsiveness: -0.18

General responsiveness: -0.50

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

response to light stimulus, protein ubiquitination, primary root development, phloem or xylem histogenesis, leaf vascular tissue pattern formation, shoot system development, cotyledon vascular tissue pattern formation

GO cellular component

plasma membrane

GO molecular function

signal transducer activity

Protein domain

Pfam	PF03000, NPH3 family

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G14230

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

16 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	-1.68	1.91E-07
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	-1.89	4.52E-08
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-1.89	3.56E-02
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	-1.92	3.63E-02
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	-2.09	4.59E-10
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-2.11	4.23E-03
GSE20278	Col, RPL18-HF, control	Col, RPL18-HF, TuMV 10 d	-2.21	2.00E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-2.38	7.01E-14
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-2.47	2.47E-11
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-2.79	2.12E-15

Showing 1 to 10 of 16 entries

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