co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G10250

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2000505: regulation of energy homeostasis	0.00E+00
2	GO:0045014: negative regulation of transcription by glucose	0.00E+00
3	GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process	0.00E+00
4	GO:0006106: fumarate metabolic process	6.74E-05
5	GO:0006898: receptor-mediated endocytosis	1.62E-04
6	GO:0016045: detection of bacterium	2.75E-04
7	GO:0010359: regulation of anion channel activity	2.75E-04
8	GO:0051513: regulation of monopolar cell growth	3.98E-04
9	GO:0080170: hydrogen peroxide transmembrane transport	3.98E-04
10	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	3.98E-04
11	GO:0030104: water homeostasis	5.32E-04
12	GO:0010109: regulation of photosynthesis	5.32E-04
13	GO:0015995: chlorophyll biosynthetic process	7.86E-04
14	GO:0006655: phosphatidylglycerol biosynthetic process	8.23E-04
15	GO:0006751: glutathione catabolic process	8.23E-04
16	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	8.23E-04
17	GO:0009228: thiamine biosynthetic process	8.23E-04
18	GO:0009942: longitudinal axis specification	9.79E-04
19	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	9.79E-04
20	GO:1900057: positive regulation of leaf senescence	1.14E-03
21	GO:1900056: negative regulation of leaf senescence	1.14E-03
22	GO:0010078: maintenance of root meristem identity	1.32E-03
23	GO:0007389: pattern specification process	1.50E-03
24	GO:0043562: cellular response to nitrogen levels	1.50E-03
25	GO:0010206: photosystem II repair	1.69E-03
26	GO:0048589: developmental growth	1.69E-03
27	GO:0009245: lipid A biosynthetic process	1.69E-03
28	GO:0010205: photoinhibition	1.89E-03
29	GO:0009638: phototropism	1.89E-03
30	GO:1903507: negative regulation of nucleic acid-templated transcription	2.31E-03
31	GO:0009684: indoleacetic acid biosynthetic process	2.31E-03
32	GO:0046856: phosphatidylinositol dephosphorylation	2.31E-03
33	GO:0009773: photosynthetic electron transport in photosystem I	2.31E-03
34	GO:0052544: defense response by callose deposition in cell wall	2.31E-03
35	GO:0010152: pollen maturation	2.53E-03
36	GO:0016024: CDP-diacylglycerol biosynthetic process	2.53E-03
37	GO:0030048: actin filament-based movement	2.76E-03
38	GO:0006108: malate metabolic process	2.76E-03
39	GO:0010588: cotyledon vascular tissue pattern formation	2.76E-03
40	GO:0009785: blue light signaling pathway	2.76E-03
41	GO:0010207: photosystem II assembly	2.99E-03
42	GO:0048467: gynoecium development	2.99E-03
43	GO:0071732: cellular response to nitric oxide	3.23E-03
44	GO:0010030: positive regulation of seed germination	3.23E-03
45	GO:0010025: wax biosynthetic process	3.48E-03
46	GO:0006636: unsaturated fatty acid biosynthetic process	3.48E-03
47	GO:2000377: regulation of reactive oxygen species metabolic process	3.73E-03
48	GO:0006633: fatty acid biosynthetic process	4.08E-03
49	GO:0009416: response to light stimulus	4.12E-03
50	GO:0016114: terpenoid biosynthetic process	4.26E-03
51	GO:0048511: rhythmic process	4.26E-03
52	GO:2000022: regulation of jasmonic acid mediated signaling pathway	4.53E-03
53	GO:0071369: cellular response to ethylene stimulus	4.81E-03
54	GO:0048443: stamen development	5.09E-03
55	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	5.38E-03
56	GO:0080022: primary root development	5.68E-03
57	GO:0034220: ion transmembrane transport	5.68E-03
58	GO:0010087: phloem or xylem histogenesis	5.68E-03
59	GO:0042631: cellular response to water deprivation	5.68E-03
60	GO:0042335: cuticle development	5.68E-03
61	GO:0009958: positive gravitropism	5.98E-03
62	GO:0071472: cellular response to salt stress	5.98E-03
63	GO:0010305: leaf vascular tissue pattern formation	5.98E-03
64	GO:0042752: regulation of circadian rhythm	6.28E-03
65	GO:0048825: cotyledon development	6.60E-03
66	GO:0009851: auxin biosynthetic process	6.60E-03
67	GO:0000302: response to reactive oxygen species	6.91E-03
68	GO:0010583: response to cyclopentenone	7.24E-03
69	GO:0016032: viral process	7.24E-03
70	GO:0071281: cellular response to iron ion	7.57E-03
71	GO:0010252: auxin homeostasis	7.90E-03
72	GO:0071805: potassium ion transmembrane transport	8.24E-03
73	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	8.87E-03
74	GO:0009627: systemic acquired resistance	9.65E-03
75	GO:0042128: nitrate assimilation	9.65E-03
76	GO:0042742: defense response to bacterium	1.01E-02
77	GO:0006869: lipid transport	1.13E-02
78	GO:0048527: lateral root development	1.19E-02
79	GO:0009631: cold acclimation	1.19E-02
80	GO:0006865: amino acid transport	1.23E-02
81	GO:0016042: lipid catabolic process	1.23E-02
82	GO:0034599: cellular response to oxidative stress	1.31E-02
83	GO:0009651: response to salt stress	1.31E-02
84	GO:0006099: tricarboxylic acid cycle	1.31E-02
85	GO:0009926: auxin polar transport	1.52E-02
86	GO:0005975: carbohydrate metabolic process	1.71E-02
87	GO:0031347: regulation of defense response	1.74E-02
88	GO:0009734: auxin-activated signaling pathway	1.79E-02
89	GO:0009664: plant-type cell wall organization	1.79E-02
90	GO:0006364: rRNA processing	1.88E-02
91	GO:0006813: potassium ion transport	1.88E-02
92	GO:0043086: negative regulation of catalytic activity	2.12E-02
93	GO:0048367: shoot system development	2.17E-02
94	GO:0051726: regulation of cell cycle	2.52E-02
95	GO:0007165: signal transduction	2.55E-02
96	GO:0009737: response to abscisic acid	2.62E-02
97	GO:0055085: transmembrane transport	2.86E-02
98	GO:0042744: hydrogen peroxide catabolic process	3.11E-02
99	GO:0006470: protein dephosphorylation	3.92E-02
100	GO:0007166: cell surface receptor signaling pathway	3.92E-02
101	GO:0016567: protein ubiquitination	4.07E-02
102	GO:0006468: protein phosphorylation	4.47E-02
103	GO:0042254: ribosome biogenesis	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0046406: magnesium protoporphyrin IX methyltransferase activity	0.00E+00
2	GO:0004333: fumarate hydratase activity	6.74E-05
3	GO:0045485: omega-6 fatty acid desaturase activity	6.74E-05
4	GO:0080097: L-tryptophan:pyruvate aminotransferase activity	1.62E-04
5	GO:0003839: gamma-glutamylcyclotransferase activity	1.62E-04
6	GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity	1.62E-04
7	GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity	1.62E-04
8	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	5.32E-04
9	GO:0010011: auxin binding	5.32E-04
10	GO:0016846: carbon-sulfur lyase activity	6.73E-04
11	GO:0031177: phosphopantetheine binding	8.23E-04
12	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	8.23E-04
13	GO:0004629: phospholipase C activity	8.23E-04
14	GO:0004130: cytochrome-c peroxidase activity	8.23E-04
15	GO:0042578: phosphoric ester hydrolase activity	8.23E-04
16	GO:0004017: adenylate kinase activity	9.79E-04
17	GO:0000035: acyl binding	9.79E-04
18	GO:0004435: phosphatidylinositol phospholipase C activity	9.79E-04
19	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	1.32E-03
20	GO:0004871: signal transducer activity	1.62E-03
21	GO:0009672: auxin:proton symporter activity	1.89E-03
22	GO:0047372: acylglycerol lipase activity	2.31E-03
23	GO:0008794: arsenate reductase (glutaredoxin) activity	2.31E-03
24	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	2.53E-03
25	GO:0031072: heat shock protein binding	2.76E-03
26	GO:0004565: beta-galactosidase activity	2.76E-03
27	GO:0010329: auxin efflux transmembrane transporter activity	2.76E-03
28	GO:0003774: motor activity	2.99E-03
29	GO:0005528: FK506 binding	3.73E-03
30	GO:0003714: transcription corepressor activity	3.73E-03
31	GO:0015079: potassium ion transmembrane transporter activity	3.99E-03
32	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.18E-03
33	GO:0003756: protein disulfide isomerase activity	5.09E-03
34	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	5.68E-03
35	GO:0019901: protein kinase binding	6.60E-03
36	GO:0004518: nuclease activity	7.24E-03
37	GO:0016791: phosphatase activity	7.90E-03
38	GO:0008483: transaminase activity	8.24E-03
39	GO:0015250: water channel activity	8.93E-03
40	GO:0005515: protein binding	1.02E-02
41	GO:0005096: GTPase activator activity	1.11E-02
42	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.15E-02
43	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.35E-02
44	GO:0016491: oxidoreductase activity	1.43E-02
45	GO:0051537: 2 iron, 2 sulfur cluster binding	1.61E-02
46	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.70E-02
47	GO:0008289: lipid binding	1.77E-02
48	GO:0015171: amino acid transmembrane transporter activity	2.02E-02
49	GO:0004650: polygalacturonase activity	2.26E-02
50	GO:0051082: unfolded protein binding	2.42E-02
51	GO:0015035: protein disulfide oxidoreductase activity	2.47E-02
52	GO:0016746: transferase activity, transferring acyl groups	2.47E-02
53	GO:0016829: lyase activity	3.00E-02
54	GO:0046910: pectinesterase inhibitor activity	3.39E-02
55	GO:0003743: translation initiation factor activity	3.98E-02
56	GO:0042802: identical protein binding	4.23E-02
57	GO:0046982: protein heterodimerization activity	4.80E-02
58	GO:0004601: peroxidase activity	4.86E-02
59	GO:0016788: hydrolase activity, acting on ester bonds	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0009507: chloroplast	4.05E-05
3	GO:0045239: tricarboxylic acid cycle enzyme complex	6.74E-05
4	GO:0043674: columella	6.74E-05
5	GO:0009941: chloroplast envelope	1.02E-04
6	GO:0009534: chloroplast thylakoid	1.55E-04
7	GO:0030093: chloroplast photosystem I	1.62E-04
8	GO:0009531: secondary cell wall	3.98E-04
9	GO:0042807: central vacuole	1.14E-03
10	GO:0031969: chloroplast membrane	1.22E-03
11	GO:0008180: COP9 signalosome	1.69E-03
12	GO:0009535: chloroplast thylakoid membrane	1.71E-03
13	GO:0016459: myosin complex	2.10E-03
14	GO:0009706: chloroplast inner membrane	2.61E-03
15	GO:0009508: plastid chromosome	2.76E-03
16	GO:0016602: CCAAT-binding factor complex	2.76E-03
17	GO:0009543: chloroplast thylakoid lumen	3.25E-03
18	GO:0009570: chloroplast stroma	3.34E-03
19	GO:0009295: nucleoid	8.24E-03
20	GO:0019005: SCF ubiquitin ligase complex	1.08E-02
21	GO:0009505: plant-type cell wall	1.34E-02
22	GO:0031977: thylakoid lumen	1.44E-02
23	GO:0000502: proteasome complex	1.88E-02
24	GO:0005886: plasma membrane	2.12E-02
25	GO:0010008: endosome membrane	2.17E-02
26	GO:0005773: vacuole	2.59E-02
27	GO:0009579: thylakoid	2.70E-02
28	GO:0010287: plastoglobule	2.73E-02
29	GO:0009705: plant-type vacuole membrane	3.57E-02
30	GO:0016021: integral component of membrane	3.95E-02