gene detail

Gene description

TAIR ID: AT5G09460

Short description: sequence-specific DNA binding transcription factors;transcription regulators

Pathogen responsiveness: -0.91

General responsiveness: -1.84

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G412430

Wheat: No orthologous gene

GO biological process

regulation of transcription, DNA-templated, transcription

GO cellular component

nucleus

GO molecular function

protein dimerization activity, transcription factor activity, sequence-specific DNA binding, protein binding, DNA binding

Protein domain

No domain annotation

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

10 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.67	5.77E-08
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.51	1.77E-02
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.09	4.54E-14
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.52	1.69E-11
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.99	1.40E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.97	1.34E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.98	8.52E-14
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.57	9.10E-03
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.12	7.56E-05
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-2.00	1.24E-03