gene detail

Gene description

TAIR ID: AT5G08415

Short description: Radical SAM superfamily protein

Pathogen responsiveness: -1.23

General responsiveness: -2.53

Orthologous

Rice: No orthologous gene

Maize:

Wheat:

GO biological process

lipoate biosynthetic process, protein lipoylation

GO cellular component

chloroplast

GO molecular function

lipoate synthase activity

Protein domain

Pfam	PF16881, N-terminal domain of lipoyl synthase of Radical_SAM family
Pfam	PF04055, Radical SAM superfamily
SMART	SM00729, Elp3

Metabolic pathway

PWY0-501: lipoate biosynthesis and incorporation I

KEGG pathway

PATH:ath00785: Lipoic acid metabolism

Transcriptional regulation

Regulator:
AT4G36990, AT4G31800

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-1.58	4.23E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.88	3.18E-08
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.51	6.63E-03
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.06	1.05E-06