Gene: AT5G05580
     

Gene description


TAIR ID: AT5G05580

Short description: fatty acid desaturase 8

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G129209   GRMZM2G128971  

Wheat:

TA.4873.1.S1_AT  


GO biological process


lipid metabolic process, oxidation-reduction process, fatty acid biosynthetic process, unsaturated fatty acid biosynthetic process, response to temperature stimulus


GO cellular component


chloroplast membrane, chloroplast envelope, chloroplast, integral component of membrane


GO molecular function


omega-3 fatty acid desaturase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water


Protein domain


PfamPF11960, Domain of unknown function (DUF3474)
PfamPF00487, Fatty acid desaturase

KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


12 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.115.85E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-2.988.37E-05
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-1.933.45E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-2.642.76E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-3.301.91E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.245.70E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-3.548.38E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.702.63E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-3.045.24E-14
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.921.47E-10
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.671.51E-09
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-1.603.79E-09






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