gene detail

Gene description

TAIR ID: AT5G02760

Short description: Protein phosphatase 2C family protein

Pathogen responsiveness: 1.20

General responsiveness: 1.90

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

protein dephosphorylation, negative regulation of leaf senescence

GO cellular component

nucleus, cytoplasm

GO molecular function

protein serine/threonine phosphatase activity, metal ion binding, phosphatase activity

Protein domain

Pfam	PF00481, Protein phosphatase 2C
SMART	SM00331, PP2C_SIG
SMART	SM00332, PP2Cc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

33 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, WT, water 4 h	Col, WT, Flg22 4 h	-2.32	2.50E-02
GSE12856	Col, WT, control	Col, WT, Bg h	-2.87	6.06E-08
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	-2.39	2.16E-07
GSE17382	Col, WT, Flg22 0 min	Col, WT, Flg22 30 min	-2.05	2.75E-02
GSE17382	Col, WT, Flg22 0 min	Col, WT, Flg22 60min	-1.90	2.72E-02
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	2.79	3.51E-05
GSE17464	Laer, control	Laer, PstDC3000 12 h	1.56	2.78E-02
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.85	4.44E-10
GSE26206	Col, WT, control	Col, WT, R.solani_AG8 7 d	1.74	1.81E-07
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	1.73	2.86E-07
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.86	7.89E-08
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-3.03	1.27E-03
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-2.73	3.76E-02
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-3.17	1.67E-02
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-3.29	3.38E-13
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-3.16	3.21E-12
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-3.24	6.50E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-3.40	2.39E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-3.35	3.74E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-3.56	1.05E-13
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-3.10	1.11E-07
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-4.19	5.99E-10
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	-1.60	4.28E-04
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	-4.76	1.19E-05
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-3.84	7.49E-07
GSE5520	Col, WT, control 10 h	Col, WT, Cor- hrpS- 10 h	-2.67	2.44E-03
GSE5520	Col, WT, control 24 h	Col, WT, PsDC3118 Cor- 24 h	-2.67	4.49E-04
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	-4.50	6.67E-08
GSE56094	Col, WT, control 1 h	Col, WT, hrpA- 1 h	-2.02	1.74E-09
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-5.19	3.19E-04
GSE6556	Col, WT, control	Col, WT, PstDC3000 AvrRpt2 48 h	-2.04	2.94E-03
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	-2.69	7.76E-05
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 90-105 min	-2.42	4.98E-02