Gene: AT5G01720
     


Gene description


TAIR ID: AT5G01720

Short description: RNI-like superfamily protein

Pathogen responsiveness: -0.81

General responsiveness: -1.06

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


ubiquitin-dependent protein catabolic process


GO cellular component


nucleus


GO molecular function


ubiquitin-protein transferase activity


Protein domain


PfamPF13516, Leucine Rich repeat
SMARTSM00367, LRR_CC

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT2G38250, AT1G24260, AT2G20180, AT4G01250

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


6 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.992.41E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.693.98E-02
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.503.76E-07
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.803.01E-08
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.042.27E-09
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h1.727.49E-07






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