gene detail

Gene description

TAIR ID: AT4G39070

Short description: B-box zinc finger family protein

Pathogen responsiveness: -0.71

General responsiveness: -1.50

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

regulation of transcription, DNA-templated, response to brassinosteroid, response to karrikin, positive regulation of photomorphogenesis, response to chitin, negative regulation of brassinosteroid mediated signaling pathway, transcription

GO cellular component

nucleus

GO molecular function

zinc ion binding, protein binding, transcription factor activity, sequence-specific DNA binding, transcription factor binding

Protein domain

Pfam	PF00643, B-box zinc finger
SMART	SM00336, BBOX

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT2G43010

Target:
AT2G34710

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE13739_EDS16_GO view
GSE26679_EDR1_GC view

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	3.87	7.43E-06
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	4.23	1.89E-06
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	3.34	4.75E-05
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	4.00	2.79E-06
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.90	1.76E-02