gene detail

Gene description

TAIR ID: AT4G38620

Short description: myb domain protein 4

Pathogen responsiveness: -0.86

General responsiveness: -0.39

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G050305

Wheat: No orthologous gene

GO biological process

transcription, DNA-templated, negative regulation of transcription, response to UV-B, response to salicylic acid, negative regulation of sinapate ester biosynthetic process, response to jasmonic acid, regulation of phenylpropanoid metabolic process, regulation of transcription from RNA polymerase II promoter, cell differentiation

GO cellular component

nucleus

GO molecular function

sequence-specific DNA binding, transcription regulatory region DNA binding, RNA polymerase II transcription factor activity, protein binding, transcription factor activity, RNA polymerase II transcription factor recruiting

Protein domain

Pfam	PF00249, Myb-like DNA-binding domain
SMART	SM00717, SANT

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT5G12870, AT1G24260, AT4G38620, AT3G08500

Target:
AT2G30490, AT3G53260, AT4G38620, AT1G51680, AT1G65060, AT5G13930

Protein-protein interaction network

The number of partners (degree) is: 4

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Flg22 1 h	1.52	1.38E-02
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.81	3.75E-03
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-1.90	1.58E-12
GSE56094	Col, WT, control 2 h	Col, WT, hrpA- 2 h	1.74	3.19E-09
GSE56094	Col, WT, control 3 h	Col, WT, PstDC3000 3 h	2.21	5.23E-13
GSE56094	Col, WT, control 4 h	Col, WT, PstDC3000 4 h	1.53	9.34E-08