gene detail

Gene description

TAIR ID: AT4G37750

Short description: Integrase-type DNA-binding superfamily protein

Pathogen responsiveness: -1.42

General responsiveness: -1.68

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G028151

Wheat:

TAAFFX.11867.1.A1_AT

GO biological process

cell differentiation, regulation of transcription, DNA-templated, transcription, glucosinolate metabolic process, flower development, regulation of cell proliferation, animal organ morphogenesis, maintenance of shoot apical meristem identity, gamete generation

GO cellular component

nucleus

GO molecular function

transcription factor activity, sequence-specific DNA binding

Protein domain

Pfam	PF00847, AP2 domain
SMART	SM00380, AP2

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT2G17950, AT1G55580, AT5G23000, AT5G61850, AT5G62000, AT1G23420

Target:
AT3G54340, AT4G27330, AT1G23420, AT5G61850, AT4G34160, AT2G34710, AT5G60690, AT1G69180, AT2G45190, AT4G18960, AT4G00180

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-1.93	2.17E-06
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-1.70	6.72E-06
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-2.22	5.15E-07
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.79	5.16E-11