co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G37750

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0044774: mitotic DNA integrity checkpoint	0.00E+00
2	GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement	0.00E+00
3	GO:0080127: fruit septum development	0.00E+00
4	GO:0046486: glycerolipid metabolic process	0.00E+00
5	GO:0006907: pinocytosis	0.00E+00
6	GO:0045014: negative regulation of transcription by glucose	0.00E+00
7	GO:0000819: sister chromatid segregation	0.00E+00
8	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
9	GO:0009734: auxin-activated signaling pathway	2.75E-04
10	GO:0032958: inositol phosphate biosynthetic process	4.84E-04
11	GO:0006426: glycyl-tRNA aminoacylation	4.84E-04
12	GO:0051013: microtubule severing	4.84E-04
13	GO:0010726: positive regulation of hydrogen peroxide metabolic process	4.84E-04
14	GO:0006438: valyl-tRNA aminoacylation	4.84E-04
15	GO:0046620: regulation of organ growth	6.11E-04
16	GO:0009926: auxin polar transport	6.98E-04
17	GO:0006423: cysteinyl-tRNA aminoacylation	1.04E-03
18	GO:0010583: response to cyclopentenone	1.04E-03
19	GO:0006650: glycerophospholipid metabolic process	1.04E-03
20	GO:0061062: regulation of nematode larval development	1.04E-03
21	GO:0001736: establishment of planar polarity	1.04E-03
22	GO:0009786: regulation of asymmetric cell division	1.04E-03
23	GO:0043039: tRNA aminoacylation	1.04E-03
24	GO:1901529: positive regulation of anion channel activity	1.04E-03
25	GO:0048829: root cap development	1.22E-03
26	GO:0006782: protoporphyrinogen IX biosynthetic process	1.22E-03
27	GO:0006518: peptide metabolic process	1.70E-03
28	GO:0016045: detection of bacterium	1.70E-03
29	GO:0031145: anaphase-promoting complex-dependent catabolic process	1.70E-03
30	GO:0001578: microtubule bundle formation	1.70E-03
31	GO:0045910: negative regulation of DNA recombination	1.70E-03
32	GO:0090506: axillary shoot meristem initiation	1.70E-03
33	GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement	1.70E-03
34	GO:0046168: glycerol-3-phosphate catabolic process	1.70E-03
35	GO:0010226: response to lithium ion	1.70E-03
36	GO:0010311: lateral root formation	2.27E-03
37	GO:0009825: multidimensional cell growth	2.32E-03
38	GO:0006424: glutamyl-tRNA aminoacylation	2.47E-03
39	GO:0010321: regulation of vegetative phase change	2.47E-03
40	GO:0045017: glycerolipid biosynthetic process	2.47E-03
41	GO:0006020: inositol metabolic process	2.47E-03
42	GO:0051513: regulation of monopolar cell growth	2.47E-03
43	GO:0030071: regulation of mitotic metaphase/anaphase transition	2.47E-03
44	GO:0006072: glycerol-3-phosphate metabolic process	2.47E-03
45	GO:0006418: tRNA aminoacylation for protein translation	3.17E-03
46	GO:0042991: transcription factor import into nucleus	3.32E-03
47	GO:0006021: inositol biosynthetic process	3.32E-03
48	GO:0009956: radial pattern formation	3.32E-03
49	GO:0048629: trichome patterning	3.32E-03
50	GO:0051322: anaphase	3.32E-03
51	GO:0030001: metal ion transport	3.42E-03
52	GO:0009733: response to auxin	3.58E-03
53	GO:0048497: maintenance of floral organ identity	4.26E-03
54	GO:0010091: trichome branching	4.54E-03
55	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	5.27E-03
56	GO:0003006: developmental process involved in reproduction	5.27E-03
57	GO:0010942: positive regulation of cell death	5.27E-03
58	GO:0016554: cytidine to uridine editing	5.27E-03
59	GO:0000226: microtubule cytoskeleton organization	5.32E-03
60	GO:0009958: positive gravitropism	5.74E-03
61	GO:0007018: microtubule-based movement	6.17E-03
62	GO:0009082: branched-chain amino acid biosynthetic process	6.36E-03
63	GO:0009099: valine biosynthetic process	6.36E-03
64	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	6.36E-03
65	GO:0000082: G1/S transition of mitotic cell cycle	7.52E-03
66	GO:0010444: guard mother cell differentiation	7.52E-03
67	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	7.52E-03
68	GO:0000712: resolution of meiotic recombination intermediates	7.52E-03
69	GO:0045995: regulation of embryonic development	7.52E-03
70	GO:1900056: negative regulation of leaf senescence	7.52E-03
71	GO:0000105: histidine biosynthetic process	8.76E-03
72	GO:0009231: riboflavin biosynthetic process	8.76E-03
73	GO:0000910: cytokinesis	9.72E-03
74	GO:0051726: regulation of cell cycle	9.92E-03
75	GO:0009097: isoleucine biosynthetic process	1.01E-02
76	GO:0032544: plastid translation	1.01E-02
77	GO:0007186: G-protein coupled receptor signaling pathway	1.01E-02
78	GO:0046916: cellular transition metal ion homeostasis	1.14E-02
79	GO:0048589: developmental growth	1.14E-02
80	GO:0009056: catabolic process	1.14E-02
81	GO:0010332: response to gamma radiation	1.14E-02
82	GO:0048507: meristem development	1.14E-02
83	GO:0015995: chlorophyll biosynthetic process	1.22E-02
84	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.23E-02
85	GO:0006779: porphyrin-containing compound biosynthetic process	1.29E-02
86	GO:1900865: chloroplast RNA modification	1.29E-02
87	GO:0009641: shade avoidance	1.44E-02
88	GO:0006298: mismatch repair	1.44E-02
89	GO:0006949: syncytium formation	1.44E-02
90	GO:0006259: DNA metabolic process	1.44E-02
91	GO:0006811: ion transport	1.49E-02
92	GO:0006265: DNA topological change	1.59E-02
93	GO:0009750: response to fructose	1.59E-02
94	GO:0048765: root hair cell differentiation	1.59E-02
95	GO:0008285: negative regulation of cell proliferation	1.59E-02
96	GO:0006865: amino acid transport	1.64E-02
97	GO:0045037: protein import into chloroplast stroma	1.75E-02
98	GO:0010582: floral meristem determinacy	1.75E-02
99	GO:0010152: pollen maturation	1.75E-02
100	GO:0006790: sulfur compound metabolic process	1.75E-02
101	GO:0006312: mitotic recombination	1.75E-02
102	GO:0012501: programmed cell death	1.75E-02
103	GO:0005983: starch catabolic process	1.75E-02
104	GO:0010102: lateral root morphogenesis	1.92E-02
105	GO:0051301: cell division	1.93E-02
106	GO:0006839: mitochondrial transport	1.96E-02
107	GO:0016042: lipid catabolic process	2.02E-02
108	GO:0007034: vacuolar transport	2.09E-02
109	GO:0010223: secondary shoot formation	2.09E-02
110	GO:0009887: animal organ morphogenesis	2.09E-02
111	GO:0071555: cell wall organization	2.09E-02
112	GO:0010540: basipetal auxin transport	2.09E-02
113	GO:0006302: double-strand break repair	2.09E-02
114	GO:0048467: gynoecium development	2.09E-02
115	GO:0010020: chloroplast fission	2.09E-02
116	GO:0009933: meristem structural organization	2.09E-02
117	GO:0009744: response to sucrose	2.21E-02
118	GO:0051707: response to other organism	2.21E-02
119	GO:0048364: root development	2.24E-02
120	GO:0046854: phosphatidylinositol phosphorylation	2.27E-02
121	GO:0006636: unsaturated fatty acid biosynthetic process	2.45E-02
122	GO:0006863: purine nucleobase transport	2.45E-02
123	GO:0009664: plant-type cell wall organization	2.78E-02
124	GO:0019953: sexual reproduction	2.83E-02
125	GO:0006874: cellular calcium ion homeostasis	2.83E-02
126	GO:0043622: cortical microtubule organization	2.83E-02
127	GO:0009736: cytokinin-activated signaling pathway	2.98E-02
128	GO:0051321: meiotic cell cycle	3.03E-02
129	GO:0003333: amino acid transmembrane transport	3.03E-02
130	GO:0009658: chloroplast organization	3.20E-02
131	GO:0007005: mitochondrion organization	3.23E-02
132	GO:0010082: regulation of root meristem growth	3.44E-02
133	GO:0001944: vasculature development	3.44E-02
134	GO:0009686: gibberellin biosynthetic process	3.44E-02
135	GO:0042127: regulation of cell proliferation	3.65E-02
136	GO:0048443: stamen development	3.65E-02
137	GO:0006284: base-excision repair	3.65E-02
138	GO:0006468: protein phosphorylation	3.78E-02
139	GO:0000271: polysaccharide biosynthetic process	4.08E-02
140	GO:0009624: response to nematode	4.24E-02
141	GO:0010305: leaf vascular tissue pattern formation	4.31E-02
142	GO:0009741: response to brassinosteroid	4.31E-02
143	GO:0045489: pectin biosynthetic process	4.31E-02
144	GO:0009793: embryo development ending in seed dormancy	4.37E-02
145	GO:0007059: chromosome segregation	4.54E-02
146	GO:0048825: cotyledon development	4.77E-02
147	GO:0009749: response to glucose	4.77E-02
148	GO:0008654: phospholipid biosynthetic process	4.77E-02
149	GO:0009416: response to light stimulus	4.85E-02
150	GO:0071554: cell wall organization or biogenesis	5.00E-02
151	GO:0002229: defense response to oomycetes	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0004401: histidinol-phosphatase activity	0.00E+00
2	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
3	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
4	GO:0009899: ent-kaurene synthase activity	0.00E+00
5	GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity	0.00E+00
6	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
7	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	1.03E-05
8	GO:0010011: auxin binding	1.31E-04
9	GO:0004818: glutamate-tRNA ligase activity	4.84E-04
10	GO:0004160: dihydroxy-acid dehydratase activity	4.84E-04
11	GO:0008568: microtubule-severing ATPase activity	4.84E-04
12	GO:0004832: valine-tRNA ligase activity	4.84E-04
13	GO:0004820: glycine-tRNA ligase activity	4.84E-04
14	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	4.84E-04
15	GO:0010347: L-galactose-1-phosphate phosphatase activity	4.84E-04
16	GO:0000829: inositol heptakisphosphate kinase activity	4.84E-04
17	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	4.84E-04
18	GO:0000828: inositol hexakisphosphate kinase activity	4.84E-04
19	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	7.32E-04
20	GO:0019156: isoamylase activity	1.04E-03
21	GO:0010296: prenylcysteine methylesterase activity	1.04E-03
22	GO:0052832: inositol monophosphate 3-phosphatase activity	1.04E-03
23	GO:0004817: cysteine-tRNA ligase activity	1.04E-03
24	GO:0004109: coproporphyrinogen oxidase activity	1.04E-03
25	GO:0008805: carbon-monoxide oxygenase activity	1.04E-03
26	GO:0008934: inositol monophosphate 1-phosphatase activity	1.04E-03
27	GO:0052833: inositol monophosphate 4-phosphatase activity	1.04E-03
28	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	1.70E-03
29	GO:0003916: DNA topoisomerase activity	2.47E-03
30	GO:0001872: (1->3)-beta-D-glucan binding	2.47E-03
31	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	2.47E-03
32	GO:0004930: G-protein coupled receptor activity	3.32E-03
33	GO:0016836: hydro-lyase activity	3.32E-03
34	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	3.32E-03
35	GO:0010328: auxin influx transmembrane transporter activity	3.32E-03
36	GO:0019199: transmembrane receptor protein kinase activity	3.32E-03
37	GO:0052689: carboxylic ester hydrolase activity	3.69E-03
38	GO:0008725: DNA-3-methyladenine glycosylase activity	4.26E-03
39	GO:0004812: aminoacyl-tRNA ligase activity	4.92E-03
40	GO:0004722: protein serine/threonine phosphatase activity	5.00E-03
41	GO:0004556: alpha-amylase activity	5.27E-03
42	GO:0030983: mismatched DNA binding	5.27E-03
43	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	6.36E-03
44	GO:0016832: aldehyde-lyase activity	6.36E-03
45	GO:0003777: microtubule motor activity	6.67E-03
46	GO:0009055: electron carrier activity	6.94E-03
47	GO:0004518: nuclease activity	7.59E-03
48	GO:0005515: protein binding	8.38E-03
49	GO:0046914: transition metal ion binding	1.01E-02
50	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	1.01E-02
51	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	1.01E-02
52	GO:0004674: protein serine/threonine kinase activity	1.12E-02
53	GO:0005524: ATP binding	1.21E-02
54	GO:0005096: GTPase activator activity	1.42E-02
55	GO:0004222: metalloendopeptidase activity	1.49E-02
56	GO:0042803: protein homodimerization activity	1.65E-02
57	GO:0000049: tRNA binding	1.75E-02
58	GO:0003725: double-stranded RNA binding	1.92E-02
59	GO:0008017: microtubule binding	1.96E-02
60	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.09E-02
61	GO:0003712: transcription cofactor activity	2.27E-02
62	GO:0005217: intracellular ligand-gated ion channel activity	2.27E-02
63	GO:0004970: ionotropic glutamate receptor activity	2.27E-02
64	GO:0004190: aspartic-type endopeptidase activity	2.27E-02
65	GO:0004519: endonuclease activity	2.38E-02
66	GO:0043621: protein self-association	2.40E-02
67	GO:0005345: purine nucleobase transmembrane transporter activity	2.83E-02
68	GO:0016301: kinase activity	2.96E-02
69	GO:0008094: DNA-dependent ATPase activity	3.03E-02
70	GO:0004176: ATP-dependent peptidase activity	3.03E-02
71	GO:0033612: receptor serine/threonine kinase binding	3.03E-02
72	GO:0008408: 3'-5' exonuclease activity	3.03E-02
73	GO:0004707: MAP kinase activity	3.03E-02
74	GO:0016298: lipase activity	3.09E-02
75	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	3.23E-02
76	GO:0016788: hydrolase activity, acting on ester bonds	3.27E-02
77	GO:0015171: amino acid transmembrane transporter activity	3.31E-02
78	GO:0030570: pectate lyase activity	3.44E-02
79	GO:0016887: ATPase activity	4.00E-02
80	GO:0003779: actin binding	4.12E-02
81	GO:0001085: RNA polymerase II transcription factor binding	4.31E-02
82	GO:0015035: protein disulfide oxidoreductase activity	4.36E-02
83	GO:0016853: isomerase activity	4.54E-02
84	GO:0046872: metal ion binding	4.63E-02
85	GO:0016762: xyloglucan:xyloglucosyl transferase activity	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0009349: riboflavin synthase complex	0.00E+00
2	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
3	GO:0000408: EKC/KEOPS complex	0.00E+00
4	GO:0000791: euchromatin	4.84E-04
5	GO:0009986: cell surface	4.90E-04
6	GO:0031357: integral component of chloroplast inner membrane	1.04E-03
7	GO:0030870: Mre11 complex	1.04E-03
8	GO:0009569: chloroplast starch grain	1.04E-03
9	GO:0030139: endocytic vesicle	1.70E-03
10	GO:0009331: glycerol-3-phosphate dehydrogenase complex	2.47E-03
11	GO:0009531: secondary cell wall	2.47E-03
12	GO:0032585: multivesicular body membrane	2.47E-03
13	GO:0005828: kinetochore microtubule	3.32E-03
14	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	3.32E-03
15	GO:0000795: synaptonemal complex	4.26E-03
16	GO:0009536: plastid	4.41E-03
17	GO:0005871: kinesin complex	4.92E-03
18	GO:0000793: condensed chromosome	5.27E-03
19	GO:0009570: chloroplast stroma	5.69E-03
20	GO:0000815: ESCRT III complex	6.36E-03
21	GO:0046658: anchored component of plasma membrane	6.66E-03
22	GO:0000794: condensed nuclear chromosome	7.52E-03
23	GO:0005874: microtubule	1.11E-02
24	GO:0000922: spindle pole	1.14E-02
25	GO:0031225: anchored component of membrane	1.27E-02
26	GO:0005884: actin filament	1.59E-02
27	GO:0005886: plasma membrane	1.78E-02
28	GO:0009574: preprophase band	1.92E-02
29	GO:0030095: chloroplast photosystem II	2.09E-02
30	GO:0009941: chloroplast envelope	2.13E-02
31	GO:0005875: microtubule associated complex	2.45E-02
32	GO:0009654: photosystem II oxygen evolving complex	2.83E-02
33	GO:0015629: actin cytoskeleton	3.44E-02
34	GO:0009706: chloroplast inner membrane	4.24E-02
35	GO:0019898: extrinsic component of membrane	4.77E-02