Gene: AT4G34530
     

Gene description


TAIR ID: AT4G34530

Short description: cryptochrome-interacting basic-helix-loop-helix 1

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice:

OS02G0705500  

Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


flower development, response to blue light, regulation of transcription, DNA-templated, transcription, positive regulation of flower development


GO cellular component


nucleus


GO molecular function


protein binding, transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF00010, Helix-loop-helix DNA-binding domain
SMARTSM00353, HLH

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260, AT2G20180

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 6

click to view PPI network

Differentially expressed condition


9 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.361.04E-03
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d-1.919.43E-03
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.374.50E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-1.532.66E-02
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-1.801.01E-02
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-1.741.27E-02
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV-1.682.92E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.686.48E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.928.50E-14






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