Gene: AT4G29040
     


Gene description


TAIR ID: AT4G29040

Short description: regulatory particle AAA-ATPase 2A

Pathogen responsiveness: -1.36

General responsiveness: -2.17

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G056569  

Wheat:

TA.6566.1.S1_AT  


GO biological process


positive regulation of RNA polymerase II transcriptional preinitiation complex assembly, root cap development, innate immune response, ubiquitin-dependent protein catabolic process, ubiquitin-dependent ERAD pathway, lateral root formation, seedling development, regulation of gene silencing, meristem structural organization, response to cadmium ion, maintenance of root meristem identity, shoot system development, female gamete generation, male gamete generation, leaf morphogenesis, response to heat, phyllome development, meristem growth, proteasome-mediated ubiquitin-dependent protein catabolic process, response to misfolded protein, root development, root morphogenesis, proteasome assembly


GO cellular component


cytosolic proteasome complex, nucleus, membrane, nuclear proteasome complex, proteasome regulatory particle, base subcomplex


GO molecular function


ATPase activity, ATP binding, proteasome-activating ATPase activity, TBP-class protein binding


Protein domain


PfamPF00004, ATPase family associated with various cellular activities (AAA)
SMARTSM00382, AAA

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G61850, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 223 (Top5%)

click to view PPI network

Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.541.04E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.157.56E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.002.27E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h1.801.14E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.195.98E-13






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