Gene: AT4G20860
     

Gene description


TAIR ID: AT4G20860

Short description: FAD-binding Berberine family protein

Pathogen responsiveness: 2.44

General responsiveness: 1.78

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


oxidation-reduction process, response to jasmonic acid


GO cellular component


plant-type cell wall, cytoplasm, extracellular region, cytosol


GO molecular function


electron carrier activity, oxidoreductase activity, acting on CH-OH group of donors, flavin adenine dinucleotide binding


Protein domain


PfamPF08031, Berberine and berberine like
PfamPF01565, FAD binding domain

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


72 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, WT, water 4 hCol, WT, Flg22 4 h4.299.26E-04
GSE11807Col, mpk6 ko, water 4 hCol, mpk6 ko, Flg22 4 h3.221.61E-02
GSE12856Col, WT, controlCol, WT, Bg h2.795.85E-06
GSE12856Col, ataf1, controlCol, ataf1, Bg h3.032.08E-06
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d2.711.38E-10
GSE13739Col, eds, control 7 dCol, eds, G.orontii 7 d2.416.62E-09
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-4.553.86E-18
GSE17464Laer, controlLaer, PstDC3000 12 h-3.841.49E-14
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-3.826.84E-15
GSE17464Penta, controlPenta, PstDC3000 12 h-4.163.80E-16
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h2.225.49E-05
GSE18329Col, WT, controlCol, WT, Hpa noco2 96 h3.197.12E-12
GSE18329Col, wrky72_1, controlCol, wrky72_1, Hpa noco2 96 h2.696.72E-11
GSE18329Col, wrky72_1, controlCol, wrky72_2, Hpa noco2 96 h2.327.28E-10
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h3.324.10E-09
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-1.711.76E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt22.141.02E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 EV2.227.12E-04
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt21.541.25E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.296.55E-06
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h3.941.08E-08
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h3.121.30E-07
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h1.944.93E-05
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h3.856.80E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h3.246.45E-08
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h3.293.25E-08
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h4.171.13E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h5.082.16E-11
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h3.392.96E-08
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h4.589.84E-03
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h5.052.06E-03
GSE52979Col, WT, acetoneCol, WT, acetone flg22_24 h2.729.01E-09
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h3.463.49E-11
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_24 h2.982.92E-09
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h3.591.76E-11
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h1.731.88E-04
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h2.921.28E-08
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h1.943.56E-05
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h3.464.39E-11
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h2.164.24E-06
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h2.261.58E-05
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h2.031.29E-05
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h2.471.91E-06
GSE56094Col, WT, control 3 hCol, WT, hrpA- 3 h2.356.03E-06
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h2.567.64E-07
GSE56094Col, WT, control 4 hCol, WT, hrpA- 4 h2.092.70E-04
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h2.173.41E-05
GSE56094Col, WT, control 5 hCol, WT, hrpA- 5 h3.066.55E-09
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h2.641.84E-07
GSE56094Col, WT, control 6 hCol, WT, hrpA- 6 h3.666.94E-12
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h2.015.91E-05
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h3.279.39E-10
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h3.209.54E-10
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h1.607.80E-04
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h2.785.37E-08
GSE5615Col, WT, GST 4 hCol, WT, GST+NPP1 4 h2.676.53E-09
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h5.336.76E-16
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h5.231.88E-15
GSE5615Col, WT, water 4 hCol, WT, LPS 4 h2.511.01E-06
GSE5616Col, WT, water 12 hCol, WT, P. infestans 12 h3.883.63E-08
GSE5616Col, WT, water 24 hCol, WT, P. infestans 24 h1.592.69E-04
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h2.471.19E-06
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 HrpA- 12 h3.061.18E-06
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h2.191.16E-05
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h3.302.10E-05
GSE73351Ws-4, map65_3, controlWs-4, map65_3, H.ara Emwa1 3 d1.626.08E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h5.917.15E-05
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h4.649.85E-04
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min5.791.89E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h5.182.56E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h4.741.02E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min5.031.41E-04






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