Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G20860

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042430: indole-containing compound metabolic process0.00E+00
2GO:0030149: sphingolipid catabolic process0.00E+00
3GO:0006793: phosphorus metabolic process0.00E+00
4GO:0051238: sequestering of metal ion0.00E+00
5GO:0006784: heme a biosynthetic process0.00E+00
6GO:0046865: terpenoid transport0.00E+00
7GO:0072722: response to amitrole0.00E+00
8GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
9GO:0042742: defense response to bacterium1.11E-08
10GO:0009617: response to bacterium1.51E-07
11GO:0071456: cellular response to hypoxia5.64E-07
12GO:0010200: response to chitin1.33E-06
13GO:0009626: plant-type hypersensitive response1.74E-05
14GO:0010120: camalexin biosynthetic process2.26E-05
15GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway2.45E-05
16GO:0006032: chitin catabolic process5.33E-05
17GO:0000272: polysaccharide catabolic process6.73E-05
18GO:0006536: glutamate metabolic process9.42E-05
19GO:0002237: response to molecule of bacterial origin1.22E-04
20GO:0070588: calcium ion transmembrane transport1.45E-04
21GO:0009697: salicylic acid biosynthetic process1.46E-04
22GO:0009751: response to salicylic acid2.20E-04
23GO:0009407: toxin catabolic process2.32E-04
24GO:0016998: cell wall macromolecule catabolic process2.60E-04
25GO:0070370: cellular heat acclimation3.65E-04
26GO:1900057: positive regulation of leaf senescence3.65E-04
27GO:0099132: ATP hydrolysis coupled cation transmembrane transport3.97E-04
28GO:0010421: hydrogen peroxide-mediated programmed cell death3.97E-04
29GO:0033306: phytol metabolic process3.97E-04
30GO:1902478: negative regulation of defense response to bacterium, incompatible interaction3.97E-04
31GO:1903648: positive regulation of chlorophyll catabolic process3.97E-04
32GO:0015760: glucose-6-phosphate transport3.97E-04
33GO:0009636: response to toxic substance5.29E-04
34GO:0010204: defense response signaling pathway, resistance gene-independent5.59E-04
35GO:0006855: drug transmembrane transport5.61E-04
36GO:0010193: response to ozone6.59E-04
37GO:0010112: regulation of systemic acquired resistance6.69E-04
38GO:0006468: protein phosphorylation7.15E-04
39GO:0010163: high-affinity potassium ion import8.60E-04
40GO:0009866: induced systemic resistance, ethylene mediated signaling pathway8.60E-04
41GO:0019752: carboxylic acid metabolic process8.60E-04
42GO:0044419: interspecies interaction between organisms8.60E-04
43GO:1902000: homogentisate catabolic process8.60E-04
44GO:0015712: hexose phosphate transport8.60E-04
45GO:0097054: L-glutamate biosynthetic process8.60E-04
46GO:0051592: response to calcium ion8.60E-04
47GO:0031648: protein destabilization8.60E-04
48GO:0009805: coumarin biosynthetic process8.60E-04
49GO:0048569: post-embryonic animal organ development8.60E-04
50GO:0090057: root radial pattern formation8.60E-04
51GO:0051607: defense response to virus9.76E-04
52GO:0009682: induced systemic resistance1.06E-03
53GO:0009816: defense response to bacterium, incompatible interaction1.12E-03
54GO:0009624: response to nematode1.19E-03
55GO:0009627: systemic acquired resistance1.20E-03
56GO:0071367: cellular response to brassinosteroid stimulus1.40E-03
57GO:0010498: proteasomal protein catabolic process1.40E-03
58GO:0034051: negative regulation of plant-type hypersensitive response1.40E-03
59GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.40E-03
60GO:0035436: triose phosphate transmembrane transport1.40E-03
61GO:0010351: lithium ion transport1.40E-03
62GO:0010476: gibberellin mediated signaling pathway1.40E-03
63GO:0010325: raffinose family oligosaccharide biosynthetic process1.40E-03
64GO:0010447: response to acidic pH1.40E-03
65GO:0010272: response to silver ion1.40E-03
66GO:0015692: lead ion transport1.40E-03
67GO:0009072: aromatic amino acid family metabolic process1.40E-03
68GO:0015714: phosphoenolpyruvate transport1.40E-03
69GO:0048281: inflorescence morphogenesis1.40E-03
70GO:0080168: abscisic acid transport1.40E-03
71GO:0034605: cellular response to heat1.54E-03
72GO:0006537: glutamate biosynthetic process2.02E-03
73GO:0010104: regulation of ethylene-activated signaling pathway2.02E-03
74GO:0010255: glucose mediated signaling pathway2.02E-03
75GO:0048530: fruit morphogenesis2.02E-03
76GO:0002679: respiratory burst involved in defense response2.02E-03
77GO:0080024: indolebutyric acid metabolic process2.02E-03
78GO:0006882: cellular zinc ion homeostasis2.02E-03
79GO:0001676: long-chain fatty acid metabolic process2.02E-03
80GO:0046836: glycolipid transport2.02E-03
81GO:0045017: glycerolipid biosynthetic process2.02E-03
82GO:0010116: positive regulation of abscisic acid biosynthetic process2.02E-03
83GO:0070301: cellular response to hydrogen peroxide2.02E-03
84GO:0055114: oxidation-reduction process2.17E-03
85GO:0006874: cellular calcium ion homeostasis2.36E-03
86GO:0010508: positive regulation of autophagy2.71E-03
87GO:0015713: phosphoglycerate transport2.71E-03
88GO:0015867: ATP transport2.71E-03
89GO:0080142: regulation of salicylic acid biosynthetic process2.71E-03
90GO:0080037: negative regulation of cytokinin-activated signaling pathway2.71E-03
91GO:0010109: regulation of photosynthesis2.71E-03
92GO:0019676: ammonia assimilation cycle2.71E-03
93GO:0046345: abscisic acid catabolic process2.71E-03
94GO:0009939: positive regulation of gibberellic acid mediated signaling pathway2.71E-03
95GO:1901002: positive regulation of response to salt stress2.71E-03
96GO:0051707: response to other organism2.73E-03
97GO:0010150: leaf senescence2.75E-03
98GO:0050832: defense response to fungus2.79E-03
99GO:0031348: negative regulation of defense response2.84E-03
100GO:0009737: response to abscisic acid3.01E-03
101GO:0007166: cell surface receptor signaling pathway3.37E-03
102GO:0034052: positive regulation of plant-type hypersensitive response3.47E-03
103GO:2000762: regulation of phenylpropanoid metabolic process3.47E-03
104GO:0045487: gibberellin catabolic process3.47E-03
105GO:0006461: protein complex assembly3.47E-03
106GO:0000304: response to singlet oxygen3.47E-03
107GO:0042391: regulation of membrane potential3.95E-03
108GO:0060918: auxin transport4.29E-03
109GO:0010337: regulation of salicylic acid metabolic process4.29E-03
110GO:0009117: nucleotide metabolic process4.29E-03
111GO:0009643: photosynthetic acclimation4.29E-03
112GO:0050665: hydrogen peroxide biosynthetic process4.29E-03
113GO:0009759: indole glucosinolate biosynthetic process4.29E-03
114GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly4.29E-03
115GO:0006561: proline biosynthetic process4.29E-03
116GO:0015691: cadmium ion transport4.29E-03
117GO:0015866: ADP transport4.29E-03
118GO:0010256: endomembrane system organization4.29E-03
119GO:0009749: response to glucose4.91E-03
120GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response5.17E-03
121GO:0009094: L-phenylalanine biosynthetic process5.17E-03
122GO:0010199: organ boundary specification between lateral organs and the meristem5.17E-03
123GO:0009854: oxidative photosynthetic carbon pathway5.17E-03
124GO:0048444: floral organ morphogenesis5.17E-03
125GO:0010555: response to mannitol5.17E-03
126GO:2000067: regulation of root morphogenesis5.17E-03
127GO:0071470: cellular response to osmotic stress5.17E-03
128GO:0002229: defense response to oomycetes5.26E-03
129GO:0009620: response to fungus5.59E-03
130GO:0006970: response to osmotic stress5.99E-03
131GO:0030026: cellular manganese ion homeostasis6.11E-03
132GO:0050829: defense response to Gram-negative bacterium6.11E-03
133GO:1902074: response to salt6.11E-03
134GO:0010044: response to aluminum ion6.11E-03
135GO:0006955: immune response6.11E-03
136GO:1900056: negative regulation of leaf senescence6.11E-03
137GO:0006952: defense response6.66E-03
138GO:0030091: protein repair7.10E-03
139GO:0010928: regulation of auxin mediated signaling pathway7.10E-03
140GO:0030162: regulation of proteolysis7.10E-03
141GO:2000070: regulation of response to water deprivation7.10E-03
142GO:0080167: response to karrikin7.42E-03
143GO:0010262: somatic embryogenesis8.15E-03
144GO:0007186: G-protein coupled receptor signaling pathway8.15E-03
145GO:0043562: cellular response to nitrogen levels8.15E-03
146GO:0009699: phenylpropanoid biosynthetic process8.15E-03
147GO:0001558: regulation of cell growth8.15E-03
148GO:0034765: regulation of ion transmembrane transport9.25E-03
149GO:0019432: triglyceride biosynthetic process9.25E-03
150GO:0009056: catabolic process9.25E-03
151GO:0051865: protein autoubiquitination9.25E-03
152GO:0009817: defense response to fungus, incompatible interaction9.96E-03
153GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.04E-02
154GO:0009870: defense response signaling pathway, resistance gene-dependent1.16E-02
155GO:0055062: phosphate ion homeostasis1.16E-02
156GO:0045087: innate immune response1.27E-02
157GO:0009698: phenylpropanoid metabolic process1.29E-02
158GO:0009089: lysine biosynthetic process via diaminopimelate1.29E-02
159GO:0052544: defense response by callose deposition in cell wall1.29E-02
160GO:0015770: sucrose transport1.29E-02
161GO:0009750: response to fructose1.29E-02
162GO:0048229: gametophyte development1.29E-02
163GO:0002213: defense response to insect1.42E-02
164GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.42E-02
165GO:0006631: fatty acid metabolic process1.51E-02
166GO:2000028: regulation of photoperiodism, flowering1.55E-02
167GO:0009718: anthocyanin-containing compound biosynthetic process1.55E-02
168GO:0042542: response to hydrogen peroxide1.57E-02
169GO:0009744: response to sucrose1.64E-02
170GO:0042343: indole glucosinolate metabolic process1.83E-02
171GO:0090351: seedling development1.83E-02
172GO:0010053: root epidermal cell differentiation1.83E-02
173GO:0009833: plant-type primary cell wall biogenesis1.98E-02
174GO:0006812: cation transport2.06E-02
175GO:0005992: trehalose biosynthetic process2.13E-02
176GO:0009695: jasmonic acid biosynthetic process2.29E-02
177GO:0051302: regulation of cell division2.29E-02
178GO:0031408: oxylipin biosynthetic process2.44E-02
179GO:0098542: defense response to other organism2.44E-02
180GO:0016226: iron-sulfur cluster assembly2.61E-02
181GO:0030433: ubiquitin-dependent ERAD pathway2.61E-02
182GO:0035428: hexose transmembrane transport2.61E-02
183GO:0019748: secondary metabolic process2.61E-02
184GO:0009814: defense response, incompatible interaction2.61E-02
185GO:0071215: cellular response to abscisic acid stimulus2.77E-02
186GO:0009686: gibberellin biosynthetic process2.77E-02
187GO:0071369: cellular response to ethylene stimulus2.77E-02
188GO:0009625: response to insect2.77E-02
189GO:0010227: floral organ abscission2.77E-02
190GO:0010091: trichome branching2.94E-02
191GO:0006817: phosphate ion transport2.94E-02
192GO:0044550: secondary metabolite biosynthetic process3.19E-02
193GO:0000271: polysaccharide biosynthetic process3.29E-02
194GO:0009958: positive gravitropism3.48E-02
195GO:0006885: regulation of pH3.48E-02
196GO:0006520: cellular amino acid metabolic process3.48E-02
197GO:0046323: glucose import3.48E-02
198GO:0048544: recognition of pollen3.66E-02
199GO:0006814: sodium ion transport3.66E-02
200GO:0006623: protein targeting to vacuole3.85E-02
201GO:0006635: fatty acid beta-oxidation4.04E-02
202GO:0032259: methylation4.41E-02
203GO:0009639: response to red or far red light4.63E-02
204GO:0010252: auxin homeostasis4.63E-02
205GO:0006464: cellular protein modification process4.63E-02
206GO:0007165: signal transduction4.64E-02
207GO:0009651: response to salt stress5.00E-02
RankGO TermAdjusted P value
1GO:0015930: glutamate synthase activity0.00E+00
2GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
3GO:0016034: maleylacetoacetate isomerase activity0.00E+00
4GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
5GO:0005516: calmodulin binding6.90E-06
6GO:0004568: chitinase activity5.33E-05
7GO:0004351: glutamate decarboxylase activity5.35E-05
8GO:0005388: calcium-transporting ATPase activity1.02E-04
9GO:0008061: chitin binding1.45E-04
10GO:0102391: decanoate--CoA ligase activity2.83E-04
11GO:0004144: diacylglycerol O-acyltransferase activity2.83E-04
12GO:0004467: long-chain fatty acid-CoA ligase activity3.65E-04
13GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity3.97E-04
14GO:0004321: fatty-acyl-CoA synthase activity3.97E-04
15GO:0010285: L,L-diaminopimelate aminotransferase activity3.97E-04
16GO:0016041: glutamate synthase (ferredoxin) activity3.97E-04
17GO:0016920: pyroglutamyl-peptidase activity3.97E-04
18GO:0090353: polygalacturonase inhibitor activity3.97E-04
19GO:0004364: glutathione transferase activity4.14E-04
20GO:0015297: antiporter activity5.33E-04
21GO:0016301: kinase activity6.53E-04
22GO:0005524: ATP binding7.91E-04
23GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity8.60E-04
24GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity8.60E-04
25GO:0050736: O-malonyltransferase activity8.60E-04
26GO:0004385: guanylate kinase activity8.60E-04
27GO:0010331: gibberellin binding8.60E-04
28GO:0045543: gibberellin 2-beta-dioxygenase activity8.60E-04
29GO:0003958: NADPH-hemoprotein reductase activity8.60E-04
30GO:0015152: glucose-6-phosphate transmembrane transporter activity8.60E-04
31GO:0008171: O-methyltransferase activity9.20E-04
32GO:0043565: sequence-specific DNA binding9.47E-04
33GO:0000975: regulatory region DNA binding1.40E-03
34GO:0031683: G-protein beta/gamma-subunit complex binding1.40E-03
35GO:0071917: triose-phosphate transmembrane transporter activity1.40E-03
36GO:0001664: G-protein coupled receptor binding1.40E-03
37GO:0015238: drug transmembrane transporter activity1.56E-03
38GO:0004867: serine-type endopeptidase inhibitor activity1.73E-03
39GO:0030170: pyridoxal phosphate binding1.97E-03
40GO:0004674: protein serine/threonine kinase activity2.01E-03
41GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity2.02E-03
42GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity2.02E-03
43GO:0017089: glycolipid transporter activity2.02E-03
44GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity2.02E-03
45GO:0008276: protein methyltransferase activity2.02E-03
46GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity2.02E-03
47GO:0010279: indole-3-acetic acid amido synthetase activity2.71E-03
48GO:0009916: alternative oxidase activity2.71E-03
49GO:0008891: glycolate oxidase activity2.71E-03
50GO:0015120: phosphoglycerate transmembrane transporter activity2.71E-03
51GO:0015368: calcium:cation antiporter activity2.71E-03
52GO:0047769: arogenate dehydratase activity2.71E-03
53GO:0004664: prephenate dehydratase activity2.71E-03
54GO:0051861: glycolipid binding2.71E-03
55GO:0015369: calcium:proton antiporter activity2.71E-03
56GO:0004871: signal transducer activity2.72E-03
57GO:0015145: monosaccharide transmembrane transporter activity3.47E-03
58GO:0031386: protein tag3.47E-03
59GO:0051538: 3 iron, 4 sulfur cluster binding3.47E-03
60GO:0010294: abscisic acid glucosyltransferase activity3.47E-03
61GO:0030551: cyclic nucleotide binding3.95E-03
62GO:0005249: voltage-gated potassium channel activity3.95E-03
63GO:0036402: proteasome-activating ATPase activity4.29E-03
64GO:0008200: ion channel inhibitor activity4.29E-03
65GO:0030976: thiamine pyrophosphate binding4.29E-03
66GO:0010181: FMN binding4.58E-03
67GO:0033743: peptide-methionine (R)-S-oxide reductase activity5.17E-03
68GO:0005347: ATP transmembrane transporter activity5.17E-03
69GO:0008113: peptide-methionine (S)-S-oxide reductase activity5.17E-03
70GO:0005242: inward rectifier potassium channel activity5.17E-03
71GO:0015217: ADP transmembrane transporter activity5.17E-03
72GO:0016831: carboxy-lyase activity6.11E-03
73GO:0008506: sucrose:proton symporter activity6.11E-03
74GO:0008483: transaminase activity6.78E-03
75GO:0004033: aldo-keto reductase (NADP) activity7.10E-03
76GO:0015491: cation:cation antiporter activity7.10E-03
77GO:0035064: methylated histone binding7.10E-03
78GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors9.25E-03
79GO:0016207: 4-coumarate-CoA ligase activity9.25E-03
80GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.10E-02
81GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.15E-02
82GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.15E-02
83GO:0030145: manganese ion binding1.15E-02
84GO:0004713: protein tyrosine kinase activity1.16E-02
85GO:0015020: glucuronosyltransferase activity1.16E-02
86GO:0005543: phospholipid binding1.29E-02
87GO:0008794: arsenate reductase (glutaredoxin) activity1.29E-02
88GO:0008559: xenobiotic-transporting ATPase activity1.29E-02
89GO:0009055: electron carrier activity1.49E-02
90GO:0004022: alcohol dehydrogenase (NAD) activity1.55E-02
91GO:0005315: inorganic phosphate transmembrane transporter activity1.55E-02
92GO:0005262: calcium channel activity1.55E-02
93GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.71E-02
94GO:0017025: TBP-class protein binding1.83E-02
95GO:0004970: ionotropic glutamate receptor activity1.83E-02
96GO:0005217: intracellular ligand-gated ion channel activity1.83E-02
97GO:0030552: cAMP binding1.83E-02
98GO:0030553: cGMP binding1.83E-02
99GO:0008134: transcription factor binding2.13E-02
100GO:0016298: lipase activity2.29E-02
101GO:0005216: ion channel activity2.29E-02
102GO:0004298: threonine-type endopeptidase activity2.44E-02
103GO:0045735: nutrient reservoir activity2.61E-02
104GO:0050660: flavin adenine dinucleotide binding2.64E-02
105GO:0016760: cellulose synthase (UDP-forming) activity2.77E-02
106GO:0022891: substrate-specific transmembrane transporter activity2.77E-02
107GO:0008233: peptidase activity2.81E-02
108GO:0005509: calcium ion binding2.87E-02
109GO:0080043: quercetin 3-O-glucosyltransferase activity2.87E-02
110GO:0080044: quercetin 7-O-glucosyltransferase activity2.87E-02
111GO:0004499: N,N-dimethylaniline monooxygenase activity2.94E-02
112GO:0015035: protein disulfide oxidoreductase activity3.24E-02
113GO:0052689: carboxylic ester hydrolase activity3.25E-02
114GO:0005451: monovalent cation:proton antiporter activity3.29E-02
115GO:0044212: transcription regulatory region DNA binding3.29E-02
116GO:0005355: glucose transmembrane transporter activity3.66E-02
117GO:0015299: solute:proton antiporter activity3.66E-02
118GO:0005215: transporter activity3.88E-02
119GO:0016740: transferase activity4.20E-02
120GO:0015385: sodium:proton antiporter activity4.43E-02
121GO:0016759: cellulose synthase activity4.63E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane3.14E-04
2GO:0016021: integral component of membrane1.54E-03
3GO:0005887: integral component of plasma membrane1.73E-03
4GO:0031597: cytosolic proteasome complex5.17E-03
5GO:0005834: heterotrimeric G-protein complex5.37E-03
6GO:0005783: endoplasmic reticulum5.85E-03
7GO:0031595: nuclear proteasome complex6.11E-03
8GO:0031225: anchored component of membrane7.08E-03
9GO:0005779: integral component of peroxisomal membrane8.15E-03
10GO:0019773: proteasome core complex, alpha-subunit complex8.15E-03
11GO:0008540: proteasome regulatory particle, base subcomplex1.04E-02
12GO:0000325: plant-type vacuole1.15E-02
13GO:0043231: intracellular membrane-bounded organelle1.55E-02
14GO:0031012: extracellular matrix1.55E-02
15GO:0046658: anchored component of plasma membrane1.80E-02
16GO:0005829: cytosol1.94E-02
17GO:0005758: mitochondrial intermembrane space2.13E-02
18GO:0000502: proteasome complex2.21E-02
19GO:0070469: respiratory chain2.29E-02
20GO:0005905: clathrin-coated pit2.44E-02
21GO:0005839: proteasome core complex2.44E-02
22GO:0030136: clathrin-coated vesicle3.12E-02
23GO:0005618: cell wall3.22E-02
24GO:0005770: late endosome3.48E-02
25GO:0005777: peroxisome3.84E-02
26GO:0005743: mitochondrial inner membrane4.25E-02
27GO:0071944: cell periphery4.43E-02
Gene type



Gene DE type