Gene: AT4G18240
     


Gene description


TAIR ID: AT4G18240

Short description: starch synthase 4

Pathogen responsiveness: -0.52

General responsiveness: -0.30

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G044744  

Wheat: No orthologous gene

GO biological process


starch biosynthetic process, starch metabolic process


GO cellular component


amyloplast, chloroplast


GO molecular function


protein binding, starch synthase activity, transferase activity, transferring glycosyl groups


Protein domain


PfamPF08323, Starch synthase catalytic domain
PfamPF00534, Glycosyl transferases group 1

Metabolic pathway


PWY-622: starch biosynthesis

KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 8

click to view PPI network

Differentially expressed condition


12 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Penta, controlPenta, Flg22 2 h-1.713.63E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-1.991.40E-09
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.795.93E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.282.32E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.361.63E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.242.85E-14
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.502.64E-09
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.009.74E-03
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.315.09E-04
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-1.691.16E-15
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.632.05E-14
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.504.54E-07






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