co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G18240

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006429: leucyl-tRNA aminoacylation	0.00E+00
2	GO:1905421: regulation of plant organ morphogenesis	0.00E+00
3	GO:0030155: regulation of cell adhesion	0.00E+00
4	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
5	GO:0090042: tubulin deacetylation	0.00E+00
6	GO:0015979: photosynthesis	5.69E-08
7	GO:0006418: tRNA aminoacylation for protein translation	1.06E-06
8	GO:0005978: glycogen biosynthetic process	1.08E-05
9	GO:0010206: photosystem II repair	1.78E-05
10	GO:0009773: photosynthetic electron transport in photosystem I	3.20E-05
11	GO:0010028: xanthophyll cycle	3.50E-05
12	GO:0000023: maltose metabolic process	3.50E-05
13	GO:0000025: maltose catabolic process	3.50E-05
14	GO:0005980: glycogen catabolic process	3.50E-05
15	GO:0019388: galactose catabolic process	8.78E-05
16	GO:0005976: polysaccharide metabolic process	8.78E-05
17	GO:0090342: regulation of cell aging	8.78E-05
18	GO:0016122: xanthophyll metabolic process	8.78E-05
19	GO:0030388: fructose 1,6-bisphosphate metabolic process	8.78E-05
20	GO:0006518: peptide metabolic process	1.52E-04
21	GO:0048281: inflorescence morphogenesis	1.52E-04
22	GO:0006000: fructose metabolic process	1.52E-04
23	GO:0009735: response to cytokinin	1.60E-04
24	GO:0019252: starch biosynthetic process	1.87E-04
25	GO:0009590: detection of gravity	2.25E-04
26	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	2.25E-04
27	GO:0010148: transpiration	2.25E-04
28	GO:0010021: amylopectin biosynthetic process	3.05E-04
29	GO:0006109: regulation of carbohydrate metabolic process	3.05E-04
30	GO:0015994: chlorophyll metabolic process	3.05E-04
31	GO:0051205: protein insertion into membrane	3.05E-04
32	GO:0015995: chlorophyll biosynthetic process	3.47E-04
33	GO:0032543: mitochondrial translation	3.89E-04
34	GO:0045038: protein import into chloroplast thylakoid membrane	3.89E-04
35	GO:0006461: protein complex assembly	3.89E-04
36	GO:0042549: photosystem II stabilization	4.78E-04
37	GO:0000470: maturation of LSU-rRNA	4.78E-04
38	GO:0070370: cellular heat acclimation	6.66E-04
39	GO:0010103: stomatal complex morphogenesis	6.66E-04
40	GO:0001558: regulation of cell growth	8.71E-04
41	GO:0006002: fructose 6-phosphate metabolic process	8.71E-04
42	GO:0009657: plastid organization	8.71E-04
43	GO:0009409: response to cold	9.07E-04
44	GO:0006783: heme biosynthetic process	9.78E-04
45	GO:0005982: starch metabolic process	1.09E-03
46	GO:0006782: protoporphyrinogen IX biosynthetic process	1.20E-03
47	GO:0043085: positive regulation of catalytic activity	1.32E-03
48	GO:0005983: starch catabolic process	1.44E-03
49	GO:0006006: glucose metabolic process	1.57E-03
50	GO:0006094: gluconeogenesis	1.57E-03
51	GO:0005986: sucrose biosynthetic process	1.57E-03
52	GO:0010102: lateral root morphogenesis	1.57E-03
53	GO:0010207: photosystem II assembly	1.70E-03
54	GO:0009266: response to temperature stimulus	1.70E-03
55	GO:0019253: reductive pentose-phosphate cycle	1.70E-03
56	GO:0005985: sucrose metabolic process	1.84E-03
57	GO:0009944: polarity specification of adaxial/abaxial axis	2.12E-03
58	GO:0051302: regulation of cell division	2.26E-03
59	GO:0016575: histone deacetylation	2.26E-03
60	GO:0007017: microtubule-based process	2.26E-03
61	GO:0061077: chaperone-mediated protein folding	2.41E-03
62	GO:0001944: vasculature development	2.71E-03
63	GO:0000413: protein peptidyl-prolyl isomerization	3.20E-03
64	GO:0006662: glycerol ether metabolic process	3.36E-03
65	GO:0042742: defense response to bacterium	3.42E-03
66	GO:1901657: glycosyl compound metabolic process	4.24E-03
67	GO:0030163: protein catabolic process	4.24E-03
68	GO:0010027: thylakoid membrane organization	4.99E-03
69	GO:0048481: plant ovule development	5.99E-03
70	GO:0009817: defense response to fungus, incompatible interaction	5.99E-03
71	GO:0034599: cellular response to oxidative stress	7.27E-03
72	GO:0006631: fatty acid metabolic process	7.95E-03
73	GO:0009965: leaf morphogenesis	9.12E-03
74	GO:0009664: plant-type cell wall organization	9.86E-03
75	GO:0043086: negative regulation of catalytic activity	1.17E-02
76	GO:0006508: proteolysis	1.42E-02
77	GO:0009414: response to water deprivation	1.91E-02
78	GO:0007623: circadian rhythm	1.96E-02
79	GO:0010150: leaf senescence	1.96E-02
80	GO:0009658: chloroplast organization	2.67E-02
81	GO:0006810: transport	2.88E-02
82	GO:0005975: carbohydrate metabolic process	2.97E-02
83	GO:0046686: response to cadmium ion	3.05E-02
84	GO:0055114: oxidation-reduction process	3.51E-02
85	GO:0045454: cell redox homeostasis	3.54E-02
86	GO:0006629: lipid metabolic process	4.11E-02
87	GO:0009408: response to heat	4.11E-02
88	GO:0008152: metabolic process	4.41E-02
89	GO:0009793: embryo development ending in seed dormancy	4.52E-02

Rank	GO Term	Adjusted P value
1	GO:0043014: alpha-tubulin binding	0.00E+00
2	GO:0004823: leucine-tRNA ligase activity	0.00E+00
3	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
4	GO:0046422: violaxanthin de-epoxidase activity	0.00E+00
5	GO:0051721: protein phosphatase 2A binding	0.00E+00
6	GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity	0.00E+00
7	GO:0042903: tubulin deacetylase activity	0.00E+00
8	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
9	GO:0002161: aminoacyl-tRNA editing activity	3.18E-07
10	GO:0004812: aminoacyl-tRNA ligase activity	2.34E-06
11	GO:0004134: 4-alpha-glucanotransferase activity	3.50E-05
12	GO:0004645: phosphorylase activity	3.50E-05
13	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	3.50E-05
14	GO:0008184: glycogen phosphorylase activity	3.50E-05
15	GO:0004853: uroporphyrinogen decarboxylase activity	3.50E-05
16	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.81E-05
17	GO:0005528: FK506 binding	7.44E-05
18	GO:0003844: 1,4-alpha-glucan branching enzyme activity	8.78E-05
19	GO:0004614: phosphoglucomutase activity	8.78E-05
20	GO:0010297: heteropolysaccharide binding	8.78E-05
21	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	8.78E-05
22	GO:0004324: ferredoxin-NADP+ reductase activity	1.52E-04
23	GO:0043169: cation binding	1.52E-04
24	GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity	2.25E-04
25	GO:0048487: beta-tubulin binding	2.25E-04
26	GO:0016851: magnesium chelatase activity	2.25E-04
27	GO:0042277: peptide binding	3.05E-04
28	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	3.05E-04
29	GO:0019199: transmembrane receptor protein kinase activity	3.05E-04
30	GO:0008236: serine-type peptidase activity	3.65E-04
31	GO:0003959: NADPH dehydrogenase activity	3.89E-04
32	GO:2001070: starch binding	4.78E-04
33	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	8.71E-04
34	GO:0008047: enzyme activator activity	1.20E-03
35	GO:0044183: protein binding involved in protein folding	1.32E-03
36	GO:0047372: acylglycerol lipase activity	1.32E-03
37	GO:0019843: rRNA binding	1.42E-03
38	GO:0000049: tRNA binding	1.44E-03
39	GO:0004252: serine-type endopeptidase activity	1.57E-03
40	GO:0008266: poly(U) RNA binding	1.70E-03
41	GO:0004857: enzyme inhibitor activity	2.12E-03
42	GO:0004407: histone deacetylase activity	2.12E-03
43	GO:0047134: protein-disulfide reductase activity	3.03E-03
44	GO:0004791: thioredoxin-disulfide reductase activity	3.53E-03
45	GO:0048038: quinone binding	3.88E-03
46	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	4.24E-03
47	GO:0005200: structural constituent of cytoskeleton	4.60E-03
48	GO:0016491: oxidoreductase activity	4.84E-03
49	GO:0102483: scopolin beta-glucosidase activity	5.58E-03
50	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	5.99E-03
51	GO:0004222: metalloendopeptidase activity	6.40E-03
52	GO:0008422: beta-glucosidase activity	7.49E-03
53	GO:0043621: protein self-association	8.88E-03
54	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.27E-02
55	GO:0015035: protein disulfide oxidoreductase activity	1.36E-02
56	GO:0030170: pyridoxal phosphate binding	1.68E-02
57	GO:0000287: magnesium ion binding	2.64E-02
58	GO:0008233: peptidase activity	3.08E-02
59	GO:0003735: structural constituent of ribosome	3.89E-02
60	GO:0003924: GTPase activity	4.11E-02
61	GO:0016787: hydrolase activity	4.19E-02

Rank	GO Term	Adjusted P value
1	GO:0098572: stromal side of plastid thylakoid membrane	0.00E+00
2	GO:0009507: chloroplast	1.89E-29
3	GO:0009570: chloroplast stroma	2.27E-19
4	GO:0009534: chloroplast thylakoid	1.22E-17
5	GO:0009535: chloroplast thylakoid membrane	5.77E-14
6	GO:0009543: chloroplast thylakoid lumen	2.33E-11
7	GO:0009941: chloroplast envelope	2.12E-09
8	GO:0031977: thylakoid lumen	6.90E-09
9	GO:0009579: thylakoid	5.28E-08
10	GO:0030095: chloroplast photosystem II	4.76E-07
11	GO:0010319: stromule	6.95E-06
12	GO:0009533: chloroplast stromal thylakoid	8.12E-06
13	GO:0010007: magnesium chelatase complex	1.52E-04
14	GO:0009501: amyloplast	7.68E-04
15	GO:0048046: apoplast	8.83E-04
16	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	9.78E-04
17	GO:0042644: chloroplast nucleoid	9.78E-04
18	GO:0045298: tubulin complex	9.78E-04
19	GO:0009508: plastid chromosome	1.57E-03
20	GO:0042651: thylakoid membrane	2.26E-03
21	GO:0009654: photosystem II oxygen evolving complex	2.26E-03
22	GO:0009523: photosystem II	3.70E-03
23	GO:0019898: extrinsic component of membrane	3.70E-03
24	GO:0009295: nucleoid	4.60E-03
25	GO:0015934: large ribosomal subunit	6.61E-03
26	GO:0009706: chloroplast inner membrane	1.33E-02
27	GO:0005840: ribosome	2.05E-02
28	GO:0005874: microtubule	3.04E-02
29	GO:0022625: cytosolic large ribosomal subunit	3.23E-02