gene detail

Gene description

TAIR ID: AT4G18030

Short description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Pathogen responsiveness: -0.39

General responsiveness: -1.37

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

unkown

GO cellular component

endosome, vacuolar membrane, Golgi apparatus, Golgi membrane, trans-Golgi network, plant-type cell wall, integral component of membrane

GO molecular function

unkown

Protein domain

Pfam	PF03141, Putative S-adenosyl-L-methionine-dependent methyltransferase

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT3G09290, AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

17 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Flg22 2 h	-2.30	2.97E-05
GSE17464	Penta, control	Penta, Flg22 2 h	-1.74	8.64E-04
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-1.94	4.17E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.77	4.39E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-2.01	2.47E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-3.03	4.71E-07
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.75	6.47E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.34	9.91E-14
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	-1.93	3.17E-02
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.97	4.60E-04
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.51	9.86E-04
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-2.15	1.15E-13
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	-1.73	8.62E-10
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.70	1.70E-09
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-1.65	3.09E-09
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	-2.24	3.50E-04
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	-1.87	1.31E-03