Gene: AT4G17230
     

Gene description


TAIR ID: AT4G17230

Short description: SCARECROW-like 13

Pathogen responsiveness: 0.05

General responsiveness: -0.36

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, transcription, response to chitin


GO cellular component


nucleus, cytoplasm


GO molecular function


transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF03514, GRAS domain family

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260, AT2G20180, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


23 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h1.919.86E-06
GSE12856Col, ataf1, controlCol, ataf1, Bg h2.476.89E-07
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h1.681.44E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.698.04E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.544.95E-10
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min2.072.75E-04
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min2.033.38E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 EV1.756.05E-07
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV1.587.15E-06
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min2.267.65E-05
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h2.457.93E-04
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h2.091.33E-03
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h1.906.61E-10
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h2.002.80E-10
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h2.518.49E-10
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h1.853.22E-09
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h1.819.48E-10
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h1.997.00E-11
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h1.662.21E-08
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h1.951.03E-10
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h1.622.47E-07
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h2.121.19E-11
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min1.908.36E-13






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