Gene: AT4G16280
     


Gene description


TAIR ID: AT4G16280

Short description: RNA binding;abscisic acid binding

Pathogen responsiveness: -2.05

General responsiveness: -2.95

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G065276  

Wheat:

TAAFFX.98485.9.S1_X_AT  


GO biological process


flower development, embryo sac development, embryo development, chromatin silencing by small RNA, regulation of flower development, cell differentiation


GO cellular component


chromatin, cytoplasm, nucleus


GO molecular function


RNA binding


Protein domain


PfamPF00397, WW domain
PfamPF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMARTSM00456, WW
SMARTSM00360, RRM

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G73805, AT5G26920, AT1G01530, AT1G69120, AT1G24260, AT5G41315, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 9 (Top20%)

click to view PPI network

Differentially expressed condition


2 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.543.46E-09
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.823.81E-03






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