gene detail

Gene description

TAIR ID: AT1G01530

Short description: AGAMOUS-like 28

Pathogen responsiveness: -2.67

General responsiveness: -5.80

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

positive regulation of transcription from RNA polymerase II promoter, transcription, DNA-templated, positive regulation of flower development

GO cellular component

nucleus

GO molecular function

transcription factor activity, sequence-specific DNA binding, RNA polymerase II regulatory region sequence-specific DNA binding, protein dimerization activity

Protein domain

Pfam	PF00319, SRF-type transcription factor (DNA-binding and dimerisation domain)
SMART	SM00432, MADS

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
none

Target:
AT4G02560, AT4G16280

Protein-protein interaction network

The number of partners (degree) is: 4

click to view PPI network

Coexpression network

GSE13739_EDS16_GO view
GSE45212_MED14_PSTDC3000_AVRRPT2 view

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	-3.08	4.19E-03
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-2.25	2.72E-02