gene detail

Gene description

TAIR ID: AT4G15110

Short description: cytochrome P450, family 97, subfamily B, polypeptide 3

Pathogen responsiveness: -0.45

General responsiveness: -0.00

Orthologous

Rice:

OS02G0173100

Maize:

GRMZM2G010221

Wheat: No orthologous gene

GO biological process

carotenoid biosynthetic process, oxidation-reduction process

GO cellular component

chloroplast envelope, chloroplast membrane, chloroplast, chloroplast stroma

GO molecular function

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, heme binding, monooxygenase activity, iron ion binding

Protein domain

Pfam	PF00067, Cytochrome P450

Metabolic pathway

CAROTENOID-PWY: superpathway of carotenoid biosynthesis
PWY-5947: lutein biosynthesis

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G11260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

11 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.77	7.70E-06
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-1.60	2.93E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.51	2.72E-09
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.93	1.44E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.15	1.13E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.74	4.40E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.87	1.15E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.61	7.36E-14
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.75	9.97E-11
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.67	1.43E-06
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.58	8.30E-08