co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G15110

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0017038: protein import	0.00E+00
2	GO:0000372: Group I intron splicing	0.00E+00
3	GO:0016560: protein import into peroxisome matrix, docking	1.83E-05
4	GO:0010289: homogalacturonan biosynthetic process	1.83E-05
5	GO:0010275: NAD(P)H dehydrogenase complex assembly	1.83E-05
6	GO:0010027: thylakoid membrane organization	3.12E-05
7	GO:0090391: granum assembly	3.35E-05
8	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	3.35E-05
9	GO:0006515: misfolded or incompletely synthesized protein catabolic process	5.17E-05
10	GO:0044211: CTP salvage	5.17E-05
11	GO:0010109: regulation of photosynthesis	7.23E-05
12	GO:0006661: phosphatidylinositol biosynthetic process	7.23E-05
13	GO:0044206: UMP salvage	7.23E-05
14	GO:0045038: protein import into chloroplast thylakoid membrane	9.53E-05
15	GO:0009107: lipoate biosynthetic process	9.53E-05
16	GO:0043097: pyrimidine nucleoside salvage	9.53E-05
17	GO:0006655: phosphatidylglycerol biosynthetic process	1.20E-04
18	GO:0006206: pyrimidine nucleobase metabolic process	1.20E-04
19	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.74E-04
20	GO:0010196: nonphotochemical quenching	1.74E-04
21	GO:0006605: protein targeting	2.03E-04
22	GO:0000373: Group II intron splicing	2.64E-04
23	GO:0006535: cysteine biosynthetic process from serine	3.28E-04
24	GO:0045036: protein targeting to chloroplast	3.28E-04
25	GO:0009073: aromatic amino acid family biosynthetic process	3.61E-04
26	GO:0016485: protein processing	3.61E-04
27	GO:0009658: chloroplast organization	4.23E-04
28	GO:0019344: cysteine biosynthetic process	5.76E-04
29	GO:0040007: growth	7.31E-04
30	GO:0000413: protein peptidyl-prolyl isomerization	8.55E-04
31	GO:0009646: response to absence of light	9.39E-04
32	GO:0008654: phospholipid biosynthetic process	9.82E-04
33	GO:0016032: viral process	1.07E-03
34	GO:0010090: trichome morphogenesis	1.11E-03
35	GO:0009567: double fertilization forming a zygote and endosperm	1.16E-03
36	GO:0006457: protein folding	1.67E-03
37	GO:0048527: lateral root development	1.70E-03
38	GO:0016051: carbohydrate biosynthetic process	1.81E-03
39	GO:0046686: response to cadmium ion	4.00E-03
40	GO:0009058: biosynthetic process	4.01E-03
41	GO:0009451: RNA modification	4.89E-03
42	GO:0009860: pollen tube growth	6.85E-03
43	GO:0080167: response to karrikin	7.55E-03
44	GO:0015979: photosynthesis	8.28E-03
45	GO:0006886: intracellular protein transport	8.75E-03
46	GO:0006397: mRNA processing	1.02E-02
47	GO:0009735: response to cytokinin	1.40E-02
48	GO:0035556: intracellular signal transduction	1.55E-02
49	GO:0045893: positive regulation of transcription, DNA-templated	1.64E-02
50	GO:0009409: response to cold	3.05E-02
51	GO:0006810: transport	3.23E-02
52	GO:0016310: phosphorylation	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:0005048: signal sequence binding	0.00E+00
2	GO:0008444: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity	6.71E-06
3	GO:0017169: CDP-alcohol phosphatidyltransferase activity	6.71E-06
4	GO:0015462: ATPase-coupled protein transmembrane transporter activity	3.35E-05
5	GO:0016992: lipoate synthase activity	3.35E-05
6	GO:0004845: uracil phosphoribosyltransferase activity	7.23E-05
7	GO:0004849: uridine kinase activity	1.46E-04
8	GO:0004124: cysteine synthase activity	1.46E-04
9	GO:0008312: 7S RNA binding	2.03E-04
10	GO:0009982: pseudouridine synthase activity	4.30E-04
11	GO:0043424: protein histidine kinase binding	6.14E-04
12	GO:0004176: ATP-dependent peptidase activity	6.53E-04
13	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	6.92E-04
14	GO:0008236: serine-type peptidase activity	1.50E-03
15	GO:0030145: manganese ion binding	1.70E-03
16	GO:0005525: GTP binding	2.11E-03
17	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.38E-03
18	GO:0051082: unfolded protein binding	3.32E-03
19	GO:0030170: pyridoxal phosphate binding	4.15E-03
20	GO:0004252: serine-type endopeptidase activity	4.15E-03
21	GO:0000287: magnesium ion binding	6.42E-03
22	GO:0003924: GTPase activity	9.92E-03
23	GO:0016740: transferase activity	1.71E-02
24	GO:0005524: ATP binding	1.92E-02
25	GO:0003723: RNA binding	2.01E-02
26	GO:0005509: calcium ion binding	2.32E-02
27	GO:0005215: transporter activity	2.64E-02
28	GO:0003729: mRNA binding	3.27E-02

Rank	GO Term	Adjusted P value
1	GO:0043233: organelle lumen	0.00E+00
2	GO:0009507: chloroplast	1.14E-07
3	GO:0009941: chloroplast envelope	9.09E-07
4	GO:0009570: chloroplast stroma	2.46E-06
5	GO:0009579: thylakoid	4.56E-06
6	GO:0009515: granal stacked thylakoid	6.71E-06
7	GO:0009532: plastid stroma	8.15E-06
8	GO:0080085: signal recognition particle, chloroplast targeting	1.83E-05
9	GO:0005782: peroxisomal matrix	3.35E-05
10	GO:0009509: chromoplast	3.35E-05
11	GO:0009535: chloroplast thylakoid membrane	6.56E-05
12	GO:0031977: thylakoid lumen	6.90E-05
13	GO:0009534: chloroplast thylakoid	1.24E-04
14	GO:0009533: chloroplast stromal thylakoid	1.74E-04
15	GO:0005802: trans-Golgi network	1.85E-04
16	GO:0009543: chloroplast thylakoid lumen	1.97E-04
17	GO:0005768: endosome	2.20E-04
18	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	2.33E-04
19	GO:0009654: photosystem II oxygen evolving complex	6.14E-04
20	GO:0019898: extrinsic component of membrane	9.82E-04
21	GO:0030529: intracellular ribonucleoprotein complex	1.30E-03
22	GO:0009706: chloroplast inner membrane	3.32E-03
23	GO:0000139: Golgi membrane	3.48E-03
24	GO:0005623: cell	3.93E-03
25	GO:0031969: chloroplast membrane	7.55E-03
26	GO:0005794: Golgi apparatus	9.68E-03
27	GO:0005777: peroxisome	1.64E-02
28	GO:0005622: intracellular	2.24E-02
29	GO:0009536: plastid	2.84E-02
30	GO:0005739: mitochondrion	3.97E-02