Gene: AT4G11840
Gene description
TAIR ID: AT4G11840
Short description: phospholipase D gamma 3
Pathogen responsiveness: NA
General responsiveness: -1.92
Orthologous
Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene
GO biological process
lipid catabolic process, phosphatidylcholine metabolic process
GO cellular component
membrane, cytoplasm
GO molecular function
N-acylphosphatidylethanolamine-specific phospholipase D activity, phospholipase D activity, calcium ion binding
Protein domain
| Pfam | PF00614, Phospholipase D Active site motif |
| Pfam | PF12357, Phospholipase D C terminal |
| Pfam | PF00168, C2 domain |
| SMART | SM00239, C2 |
| SMART | SM00155, PLDc |
Metabolic pathway
PWY-3561: choline biosynthesis III
PWY-4762: superpathway of choline biosynthesis
PWY-7039: phosphatidate metabolism, as a signaling molecule
LIPASYN-PWY: phospholipases
KEGG pathway
PATH:ath00564: Glycerophospholipid metabolism
PATH:ath00565: Ether lipid metabolism
PATH:ath04144: Endocytosis
click to view PPI networkCoexpression network
Differentially expressed condition 
18 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE17500 | Col, 35S:AFB1, control 0 h | Col, 35S:AFB1, PstDC3000 24 h | 1.69 | 3.19E-04 |
| GSE17500 | Col, WT, control 0 h | Col, WT, PstDC3000 24 h | 1.95 | 5.85E-05 |
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | 2.33 | 4.20E-07 |
| GSE37269 | Ei2, WT, control | Ei2, WT, TEV 21 d | -1.69 | 8.08E-03 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 EV | 1.53 | 2.35E-02 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | 2.15 | 9.10E-13 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | 1.89 | 8.06E-12 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | 1.81 | 1.18E-11 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 2.49 | 1.61E-13 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | 1.95 | 3.24E-12 |
| GSE45214 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 4 h | 2.05 | 8.48E-09 |
| GSE45214 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 1.56 | 4.43E-07 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | 2.46 | 2.68E-10 |
| GSE45214 | Col, npr1, PstDC3000 AvrRpt2 0 h | Col, npr1, PstDC3000 AvrRpt2 4 h | 1.95 | 2.62E-08 |
| GSE52979 | Col, WT, acetone | Col, WT, acetone flg22_2 h | 1.58 | 5.75E-09 |
| GSE52979 | Col, WT, oxo_C14_HSL | Col, WT, oxo_C14_HSL flg22_2 h | 1.58 | 5.22E-09 |
| GSE58954 | Col, WT, Psm AvrRpt2 0 h | Col, WT, Psm AvrRpt2 6 h | 1.89 | 5.25E-04 |
| GSE9674 | Ws-4, AtMYB30 ox, control | Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h | 2.55 | 1.85E-04 |
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