co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G11840

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
2	GO:0035264: multicellular organism growth	0.00E+00
3	GO:0010200: response to chitin	7.07E-10
4	GO:0070588: calcium ion transmembrane transport	5.93E-07
5	GO:0006468: protein phosphorylation	4.43E-06
6	GO:0042742: defense response to bacterium	1.31E-05
7	GO:0002237: response to molecule of bacterial origin	2.45E-05
8	GO:0050832: defense response to fungus	2.68E-05
9	GO:0010508: positive regulation of autophagy	2.77E-05
10	GO:0080142: regulation of salicylic acid biosynthetic process	2.77E-05
11	GO:0009697: salicylic acid biosynthetic process	4.46E-05
12	GO:0051938: L-glutamate import	1.93E-04
13	GO:0051245: negative regulation of cellular defense response	1.93E-04
14	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	1.93E-04
15	GO:0010941: regulation of cell death	1.93E-04
16	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.93E-04
17	GO:0006643: membrane lipid metabolic process	1.93E-04
18	GO:0007229: integrin-mediated signaling pathway	1.93E-04
19	GO:0080157: regulation of plant-type cell wall organization or biogenesis	1.93E-04
20	GO:0050691: regulation of defense response to virus by host	1.93E-04
21	GO:0015784: GDP-mannose transport	1.93E-04
22	GO:0009816: defense response to bacterium, incompatible interaction	2.97E-04
23	GO:0007064: mitotic sister chromatid cohesion	3.32E-04
24	GO:0043069: negative regulation of programmed cell death	3.32E-04
25	GO:0008219: cell death	3.92E-04
26	GO:0002221: pattern recognition receptor signaling pathway	4.33E-04
27	GO:0043091: L-arginine import	4.33E-04
28	GO:0015802: basic amino acid transport	4.33E-04
29	GO:0007166: cell surface receptor signaling pathway	6.83E-04
30	GO:0048281: inflorescence morphogenesis	7.06E-04
31	GO:0010581: regulation of starch biosynthetic process	7.06E-04
32	GO:0002230: positive regulation of defense response to virus by host	7.06E-04
33	GO:1900140: regulation of seedling development	7.06E-04
34	GO:0015783: GDP-fucose transport	7.06E-04
35	GO:0009409: response to cold	7.59E-04
36	GO:0006952: defense response	8.08E-04
37	GO:0072334: UDP-galactose transmembrane transport	1.01E-03
38	GO:0002679: respiratory burst involved in defense response	1.01E-03
39	GO:0033014: tetrapyrrole biosynthetic process	1.01E-03
40	GO:0010306: rhamnogalacturonan II biosynthetic process	1.01E-03
41	GO:0006612: protein targeting to membrane	1.01E-03
42	GO:0000187: activation of MAPK activity	1.01E-03
43	GO:0046713: borate transport	1.01E-03
44	GO:0009814: defense response, incompatible interaction	1.02E-03
45	GO:0071456: cellular response to hypoxia	1.02E-03
46	GO:0045088: regulation of innate immune response	1.34E-03
47	GO:0010363: regulation of plant-type hypersensitive response	1.34E-03
48	GO:0010107: potassium ion import	1.34E-03
49	GO:2000038: regulation of stomatal complex development	1.34E-03
50	GO:0060548: negative regulation of cell death	1.34E-03
51	GO:0046345: abscisic acid catabolic process	1.34E-03
52	GO:0010118: stomatal movement	1.40E-03
53	GO:0009626: plant-type hypersensitive response	1.41E-03
54	GO:0006979: response to oxidative stress	1.48E-03
55	GO:0046777: protein autophosphorylation	1.65E-03
56	GO:0010225: response to UV-C	1.70E-03
57	GO:0032957: inositol trisphosphate metabolic process	1.70E-03
58	GO:0045487: gibberellin catabolic process	1.70E-03
59	GO:0010117: photoprotection	1.70E-03
60	GO:0002229: defense response to oomycetes	1.85E-03
61	GO:0006891: intra-Golgi vesicle-mediated transport	1.85E-03
62	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.10E-03
63	GO:0046855: inositol phosphate dephosphorylation	2.10E-03
64	GO:1900425: negative regulation of defense response to bacterium	2.10E-03
65	GO:0010405: arabinogalactan protein metabolic process	2.10E-03
66	GO:0051607: defense response to virus	2.52E-03
67	GO:0042372: phylloquinone biosynthetic process	2.52E-03
68	GO:2000037: regulation of stomatal complex patterning	2.52E-03
69	GO:1900056: negative regulation of leaf senescence	2.96E-03
70	GO:0070370: cellular heat acclimation	2.96E-03
71	GO:0010044: response to aluminum ion	2.96E-03
72	GO:0010161: red light signaling pathway	2.96E-03
73	GO:0046470: phosphatidylcholine metabolic process	2.96E-03
74	GO:0048193: Golgi vesicle transport	3.93E-03
75	GO:0010120: camalexin biosynthetic process	3.93E-03
76	GO:0043562: cellular response to nitrogen levels	3.93E-03
77	GO:0009617: response to bacterium	4.12E-03
78	GO:0009051: pentose-phosphate shunt, oxidative branch	4.44E-03
79	GO:0051865: protein autoubiquitination	4.44E-03
80	GO:0090333: regulation of stomatal closure	4.44E-03
81	GO:0006783: heme biosynthetic process	4.44E-03
82	GO:0010112: regulation of systemic acquired resistance	4.44E-03
83	GO:0048354: mucilage biosynthetic process involved in seed coat development	4.99E-03
84	GO:0009870: defense response signaling pathway, resistance gene-dependent	5.55E-03
85	GO:0009738: abscisic acid-activated signaling pathway	6.11E-03
86	GO:0030148: sphingolipid biosynthetic process	6.13E-03
87	GO:0046856: phosphatidylinositol dephosphorylation	6.13E-03
88	GO:0006970: response to osmotic stress	6.30E-03
89	GO:0012501: programmed cell death	6.73E-03
90	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	6.73E-03
91	GO:0006006: glucose metabolic process	7.36E-03
92	GO:0010229: inflorescence development	7.36E-03
93	GO:0055046: microgametogenesis	7.36E-03
94	GO:0080167: response to karrikin	7.54E-03
95	GO:0006486: protein glycosylation	7.63E-03
96	GO:0034605: cellular response to heat	8.01E-03
97	GO:0007034: vacuolar transport	8.01E-03
98	GO:0009969: xyloglucan biosynthetic process	8.67E-03
99	GO:0042343: indole glucosinolate metabolic process	8.67E-03
100	GO:0090351: seedling development	8.67E-03
101	GO:0009863: salicylic acid mediated signaling pathway	1.01E-02
102	GO:0006487: protein N-linked glycosylation	1.01E-02
103	GO:0018105: peptidyl-serine phosphorylation	1.12E-02
104	GO:0048278: vesicle docking	1.15E-02
105	GO:0031408: oxylipin biosynthetic process	1.15E-02
106	GO:0009742: brassinosteroid mediated signaling pathway	1.15E-02
107	GO:0003333: amino acid transmembrane transport	1.15E-02
108	GO:0051260: protein homooligomerization	1.15E-02
109	GO:0098542: defense response to other organism	1.15E-02
110	GO:0031348: negative regulation of defense response	1.23E-02
111	GO:0016567: protein ubiquitination	1.29E-02
112	GO:0009686: gibberellin biosynthetic process	1.31E-02
113	GO:0010227: floral organ abscission	1.31E-02
114	GO:0010584: pollen exine formation	1.39E-02
115	GO:0019722: calcium-mediated signaling	1.39E-02
116	GO:0042147: retrograde transport, endosome to Golgi	1.47E-02
117	GO:0042391: regulation of membrane potential	1.55E-02
118	GO:0000271: polysaccharide biosynthetic process	1.55E-02
119	GO:0009651: response to salt stress	1.56E-02
120	GO:0045489: pectin biosynthetic process	1.63E-02
121	GO:0061025: membrane fusion	1.72E-02
122	GO:0010193: response to ozone	1.90E-02
123	GO:0009737: response to abscisic acid	1.97E-02
124	GO:0016032: viral process	1.99E-02
125	GO:0030163: protein catabolic process	2.08E-02
126	GO:0006470: protein dephosphorylation	2.16E-02
127	GO:0009639: response to red or far red light	2.18E-02
128	GO:0010468: regulation of gene expression	2.25E-02
129	GO:0000910: cytokinesis	2.37E-02
130	GO:0009911: positive regulation of flower development	2.47E-02
131	GO:0001666: response to hypoxia	2.47E-02
132	GO:0009615: response to virus	2.47E-02
133	GO:0009611: response to wounding	2.62E-02
134	GO:0006906: vesicle fusion	2.67E-02
135	GO:0009627: systemic acquired resistance	2.67E-02
136	GO:0035556: intracellular signal transduction	2.73E-02
137	GO:0015995: chlorophyll biosynthetic process	2.77E-02
138	GO:0048573: photoperiodism, flowering	2.77E-02
139	GO:0016049: cell growth	2.88E-02
140	GO:0010311: lateral root formation	3.09E-02
141	GO:0009832: plant-type cell wall biogenesis	3.09E-02
142	GO:0009867: jasmonic acid mediated signaling pathway	3.53E-02
143	GO:0016051: carbohydrate biosynthetic process	3.53E-02
144	GO:0006887: exocytosis	3.99E-02
145	GO:0042542: response to hydrogen peroxide	4.11E-02
146	GO:0045892: negative regulation of transcription, DNA-templated	4.39E-02
147	GO:0006886: intracellular protein transport	4.46E-02
148	GO:0009644: response to high light intensity	4.47E-02
149	GO:0008643: carbohydrate transport	4.47E-02
150	GO:0031347: regulation of defense response	4.84E-02
151	GO:0000165: MAPK cascade	4.84E-02
152	GO:0009846: pollen germination	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0005458: GDP-mannose transmembrane transporter activity	0.00E+00
2	GO:0005388: calcium-transporting ATPase activity	3.36E-07
3	GO:0016301: kinase activity	1.15E-06
4	GO:0005524: ATP binding	2.18E-05
5	GO:0005516: calmodulin binding	3.23E-05
6	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.56E-04
7	GO:0015085: calcium ion transmembrane transporter activity	1.93E-04
8	GO:0080042: ADP-glucose pyrophosphohydrolase activity	1.93E-04
9	GO:0004325: ferrochelatase activity	1.93E-04
10	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	1.93E-04
11	GO:0008909: isochorismate synthase activity	1.93E-04
12	GO:0031127: alpha-(1,2)-fucosyltransferase activity	1.93E-04
13	GO:0004672: protein kinase activity	2.44E-04
14	GO:0017110: nucleoside-diphosphatase activity	4.33E-04
15	GO:0045140: inositol phosphoceramide synthase activity	4.33E-04
16	GO:0080041: ADP-ribose pyrophosphohydrolase activity	4.33E-04
17	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	5.00E-04
18	GO:0004674: protein serine/threonine kinase activity	5.78E-04
19	GO:0052659: inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity	7.06E-04
20	GO:0005457: GDP-fucose transmembrane transporter activity	7.06E-04
21	GO:0033612: receptor serine/threonine kinase binding	9.35E-04
22	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.01E-03
23	GO:0004445: inositol-polyphosphate 5-phosphatase activity	1.01E-03
24	GO:0015181: arginine transmembrane transporter activity	1.01E-03
25	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	1.01E-03
26	GO:0052658: inositol-1,4,5-trisphosphate 5-phosphatase activity	1.01E-03
27	GO:0015189: L-lysine transmembrane transporter activity	1.01E-03
28	GO:0008234: cysteine-type peptidase activity	1.20E-03
29	GO:0005509: calcium ion binding	1.24E-03
30	GO:0005313: L-glutamate transmembrane transporter activity	1.34E-03
31	GO:0004345: glucose-6-phosphate dehydrogenase activity	1.34E-03
32	GO:0005249: voltage-gated potassium channel activity	1.40E-03
33	GO:0010294: abscisic acid glucosyltransferase activity	1.70E-03
34	GO:0005459: UDP-galactose transmembrane transporter activity	1.70E-03
35	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.70E-03
36	GO:0047631: ADP-ribose diphosphatase activity	1.70E-03
37	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.70E-03
38	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.10E-03
39	GO:0000210: NAD+ diphosphatase activity	2.10E-03
40	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	2.10E-03
41	GO:0035252: UDP-xylosyltransferase activity	2.10E-03
42	GO:0019900: kinase binding	2.52E-03
43	GO:0005338: nucleotide-sugar transmembrane transporter activity	2.96E-03
44	GO:0004620: phospholipase activity	2.96E-03
45	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	2.96E-03
46	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.98E-03
47	GO:0004683: calmodulin-dependent protein kinase activity	3.14E-03
48	GO:0004708: MAP kinase kinase activity	3.43E-03
49	GO:0004630: phospholipase D activity	3.93E-03
50	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	3.93E-03
51	GO:0008417: fucosyltransferase activity	4.44E-03
52	GO:0015174: basic amino acid transmembrane transporter activity	4.99E-03
53	GO:0004713: protein tyrosine kinase activity	5.55E-03
54	GO:0008559: xenobiotic-transporting ATPase activity	6.13E-03
55	GO:0047372: acylglycerol lipase activity	6.13E-03
56	GO:0043531: ADP binding	6.45E-03
57	GO:0008378: galactosyltransferase activity	6.73E-03
58	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	6.73E-03
59	GO:0015095: magnesium ion transmembrane transporter activity	7.36E-03
60	GO:0005262: calcium channel activity	7.36E-03
61	GO:0030553: cGMP binding	8.67E-03
62	GO:0004190: aspartic-type endopeptidase activity	8.67E-03
63	GO:0030552: cAMP binding	8.67E-03
64	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	9.32E-03
65	GO:0005216: ion channel activity	1.08E-02
66	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.23E-02
67	GO:0016758: transferase activity, transferring hexosyl groups	1.33E-02
68	GO:0030551: cyclic nucleotide binding	1.55E-02
69	GO:0016757: transferase activity, transferring glycosyl groups	1.60E-02
70	GO:0003713: transcription coactivator activity	1.63E-02
71	GO:0010181: FMN binding	1.72E-02
72	GO:0004197: cysteine-type endopeptidase activity	1.99E-02
73	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.27E-02
74	GO:0008375: acetylglucosaminyltransferase activity	2.67E-02
75	GO:0004721: phosphoprotein phosphatase activity	2.77E-02
76	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.88E-02
77	GO:0003682: chromatin binding	3.09E-02
78	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.31E-02
79	GO:0030246: carbohydrate binding	3.69E-02
80	GO:0000149: SNARE binding	3.76E-02
81	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.76E-02
82	GO:0050661: NADP binding	3.87E-02
83	GO:0005484: SNAP receptor activity	4.23E-02
84	GO:0004722: protein serine/threonine phosphatase activity	4.73E-02
85	GO:0051287: NAD binding	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	6.47E-09
2	GO:0016021: integral component of membrane	3.89E-04
3	GO:0005887: integral component of plasma membrane	9.67E-04
4	GO:0008076: voltage-gated potassium channel complex	1.01E-03
5	GO:0030173: integral component of Golgi membrane	2.52E-03
6	GO:0030176: integral component of endoplasmic reticulum membrane	8.67E-03
7	GO:0005795: Golgi stack	8.67E-03
8	GO:0005794: Golgi apparatus	8.70E-03
9	GO:0000139: Golgi membrane	9.02E-03
10	GO:0010008: endosome membrane	9.32E-03
11	GO:0043234: protein complex	9.35E-03
12	GO:0005769: early endosome	9.35E-03
13	GO:0012505: endomembrane system	1.06E-02
14	GO:0043231: intracellular membrane-bounded organelle	1.40E-02
15	GO:0009504: cell plate	1.81E-02
16	GO:0032580: Golgi cisterna membrane	2.18E-02
17	GO:0000325: plant-type vacuole	3.31E-02
18	GO:0031201: SNARE complex	3.99E-02
19	GO:0090406: pollen tube	4.23E-02