co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G11840

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance	0.00E+00
2	GO:0006643: membrane lipid metabolic process	4.45E-05
3	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	1.10E-04
4	GO:0051252: regulation of RNA metabolic process	1.10E-04
5	GO:0006954: inflammatory response	1.89E-04
6	GO:0006517: protein deglycosylation	1.89E-04
7	GO:0006515: misfolded or incompletely synthesized protein catabolic process	2.78E-04
8	GO:0000187: activation of MAPK activity	2.78E-04
9	GO:0006516: glycoprotein catabolic process	2.78E-04
10	GO:0009617: response to bacterium	3.43E-04
11	GO:0010188: response to microbial phytotoxin	3.73E-04
12	GO:0009407: toxin catabolic process	5.68E-04
13	GO:0060918: auxin transport	5.82E-04
14	GO:0006952: defense response	8.05E-04
15	GO:0010044: response to aluminum ion	8.11E-04
16	GO:0046470: phosphatidylcholine metabolic process	8.11E-04
17	GO:0071446: cellular response to salicylic acid stimulus	8.11E-04
18	GO:0051707: response to other organism	8.29E-04
19	GO:0009636: response to toxic substance	9.25E-04
20	GO:0006979: response to oxidative stress	9.29E-04
21	GO:2000031: regulation of salicylic acid mediated signaling pathway	1.06E-03
22	GO:0006995: cellular response to nitrogen starvation	1.47E-03
23	GO:0006468: protein phosphorylation	1.54E-03
24	GO:0000027: ribosomal large subunit assembly	2.60E-03
25	GO:0010150: leaf senescence	2.63E-03
26	GO:0007166: cell surface receptor signaling pathway	3.00E-03
27	GO:0030433: ubiquitin-dependent ERAD pathway	3.14E-03
28	GO:0009814: defense response, incompatible interaction	3.14E-03
29	GO:0009625: response to insect	3.33E-03
30	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	3.73E-03
31	GO:0000413: protein peptidyl-prolyl isomerization	3.93E-03
32	GO:0010051: xylem and phloem pattern formation	3.93E-03
33	GO:0042631: cellular response to water deprivation	3.93E-03
34	GO:0010197: polar nucleus fusion	4.14E-03
35	GO:0009646: response to absence of light	4.35E-03
36	GO:0000302: response to reactive oxygen species	4.77E-03
37	GO:0010193: response to ozone	4.77E-03
38	GO:0019761: glucosinolate biosynthetic process	4.99E-03
39	GO:0006904: vesicle docking involved in exocytosis	5.68E-03
40	GO:0009615: response to virus	6.15E-03
41	GO:0009816: defense response to bacterium, incompatible interaction	6.39E-03
42	GO:0009751: response to salicylic acid	7.27E-03
43	GO:0009813: flavonoid biosynthetic process	7.65E-03
44	GO:0010119: regulation of stomatal movement	8.18E-03
45	GO:0009631: cold acclimation	8.18E-03
46	GO:0006099: tricarboxylic acid cycle	8.99E-03
47	GO:0006887: exocytosis	9.83E-03
48	GO:0000165: MAPK cascade	1.19E-02
49	GO:0031347: regulation of defense response	1.19E-02
50	GO:0051603: proteolysis involved in cellular protein catabolic process	1.32E-02
51	GO:0042545: cell wall modification	1.61E-02
52	GO:0009553: embryo sac development	1.61E-02
53	GO:0018105: peptidyl-serine phosphorylation	1.68E-02
54	GO:0006457: protein folding	1.70E-02
55	GO:0009790: embryo development	2.16E-02
56	GO:0045490: pectin catabolic process	2.43E-02
57	GO:0009414: response to water deprivation	2.60E-02
58	GO:0006470: protein dephosphorylation	2.68E-02
59	GO:0009409: response to cold	3.60E-02
60	GO:0009723: response to ethylene	3.68E-02
61	GO:0080167: response to karrikin	3.87E-02
62	GO:0010200: response to chitin	3.96E-02
63	GO:0046777: protein autophosphorylation	4.06E-02
64	GO:0044550: secondary metabolite biosynthetic process	4.11E-02
65	GO:0006869: lipid transport	4.69E-02
66	GO:0016042: lipid catabolic process	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0015370: solute:sodium symporter activity	0.00E+00
2	GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity	0.00E+00
3	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	4.45E-05
4	GO:0008428: ribonuclease inhibitor activity	1.10E-04
5	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	1.10E-04
6	GO:0047364: desulfoglucosinolate sulfotransferase activity	1.10E-04
7	GO:0009044: xylan 1,4-beta-xylosidase activity	3.73E-04
8	GO:0015204: urea transmembrane transporter activity	3.73E-04
9	GO:0030247: polysaccharide binding	4.68E-04
10	GO:0045431: flavonol synthase activity	4.75E-04
11	GO:0008948: oxaloacetate decarboxylase activity	4.75E-04
12	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	4.75E-04
13	GO:0016301: kinase activity	6.65E-04
14	GO:0004364: glutathione transferase activity	7.98E-04
15	GO:0043295: glutathione binding	8.11E-04
16	GO:0004708: MAP kinase kinase activity	9.32E-04
17	GO:0004630: phospholipase D activity	1.06E-03
18	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	1.06E-03
19	GO:0031625: ubiquitin protein ligase binding	1.21E-03
20	GO:0016746: transferase activity, transferring acyl groups	1.58E-03
21	GO:0031072: heat shock protein binding	1.92E-03
22	GO:0003712: transcription cofactor activity	2.25E-03
23	GO:0008146: sulfotransferase activity	2.25E-03
24	GO:0008810: cellulase activity	3.33E-03
25	GO:0005509: calcium ion binding	4.56E-03
26	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	5.68E-03
27	GO:0009931: calcium-dependent protein serine/threonine kinase activity	6.64E-03
28	GO:0004683: calmodulin-dependent protein kinase activity	6.89E-03
29	GO:0004674: protein serine/threonine kinase activity	1.02E-02
30	GO:0004185: serine-type carboxypeptidase activity	1.04E-02
31	GO:0015293: symporter activity	1.13E-02
32	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.16E-02
33	GO:0046872: metal ion binding	1.18E-02
34	GO:0045330: aspartyl esterase activity	1.38E-02
35	GO:0030599: pectinesterase activity	1.58E-02
36	GO:0051082: unfolded protein binding	1.65E-02
37	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.73E-02
38	GO:0005516: calmodulin binding	1.98E-02
39	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.31E-02
40	GO:0046910: pectinesterase inhibitor activity	2.31E-02
41	GO:0016491: oxidoreductase activity	3.50E-02
42	GO:0008233: peptidase activity	3.82E-02
43	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	4.65E-02
44	GO:0004722: protein serine/threonine phosphatase activity	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0045252: oxoglutarate dehydrogenase complex	4.45E-05
2	GO:0070062: extracellular exosome	2.78E-04
3	GO:0005578: proteinaceous extracellular matrix	1.92E-03
4	GO:0005886: plasma membrane	2.72E-03
5	GO:0000145: exocyst	4.99E-03
6	GO:0071944: cell periphery	5.22E-03
7	GO:0009505: plant-type cell wall	6.73E-03
8	GO:0005618: cell wall	7.35E-03
9	GO:0000151: ubiquitin ligase complex	7.39E-03
10	GO:0005773: vacuole	1.14E-02
11	GO:0005829: cytosol	1.28E-02
12	GO:0005737: cytoplasm	1.43E-02
13	GO:0046658: anchored component of plasma membrane	2.97E-02
14	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	3.55E-02
15	GO:0005730: nucleolus	4.49E-02