gene detail

Gene description

TAIR ID: AT4G09300

Short description: LisH and RanBPM domains containing protein

Pathogen responsiveness: -1.11

General responsiveness: -2.13

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

nucleus

GO molecular function

molecular_function

Protein domain

Pfam	PF10607, CTLH/CRA C-terminal to LisH motif domain
Pfam	PF08513, LisH
SMART	SM00667, LisH
SMART	SM00757, CRA
SMART	SM00668, CTLH

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G14230

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

Differentially expressed condition

7 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	2.82	3.32E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.75	6.66E-12
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	2.70	9.20E-12
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	2.67	7.14E-04
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	2.33	5.56E-11
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	2.17	1.18E-03
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	1.85	1.84E-09

Showing 1 to 7 of 7 entries