Gene: AT4G09300
     

Gene description


TAIR ID: AT4G09300

Short description: LisH and RanBPM domains containing protein

Pathogen responsiveness: -1.11

General responsiveness: -2.13

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


biological_process


GO cellular component


nucleus


GO molecular function


molecular_function


Protein domain


PfamPF10607, CTLH/CRA C-terminal to LisH motif domain
PfamPF08513, LisH
SMARTSM00667, LisH
SMARTSM00757, CRA
SMARTSM00668, CTLH

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G14230

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


7 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.335.56E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.709.20E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h1.851.84E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.756.66E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.823.32E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.171.18E-03
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h2.677.14E-04






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