Gene: AT4G04920
     


Gene description


TAIR ID: AT4G04920

Short description: sensitive to freezing 6

Pathogen responsiveness: -1.32

General responsiveness: -3.58

Orthologous


Rice:

OS10G0498700  

Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of ethylene-activated signaling pathway, regulation of plant-type cell wall cellulose biosynthetic process, root development, positive regulation of systemic acquired resistance, regulation of jasmonic acid mediated signaling pathway, circadian regulation of gene expression, regulation of long-day photoperiodism, flowering, regulation of transcription, DNA-templated, cold acclimation, response to osmotic stress, regulation of cell wall pectin metabolic process


GO cellular component


nucleus


GO molecular function


molecular_function


Protein domain


No domain annotation

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G13450, AT1G24260, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


7 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.099.03E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.164.15E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.932.84E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h1.671.58E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.136.85E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.272.00E-14
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.043.16E-10






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