Gene: AT4G01460
     

Gene description


TAIR ID: AT4G01460

Short description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Pathogen responsiveness: 0.28

General responsiveness: 0.81

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, transcription


GO cellular component


nucleus


GO molecular function


transcription factor activity, sequence-specific DNA binding, protein binding


Protein domain


PfamPF00010, Helix-loop-helix DNA-binding domain
SMARTSM00353, HLH

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT3G24050, AT1G24260, AT5G61850, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


26 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h-2.091.98E-06
GSE12856Col, ataf1, controlCol, ataf1, Bg h-2.179.82E-07
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d1.508.39E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.534.45E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-3.862.78E-14
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.842.03E-02
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-1.842.26E-07
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-1.861.32E-07
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-1.685.81E-07
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV-1.544.14E-06
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-3.633.95E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.732.60E-06
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-3.046.73E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-3.371.29E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.861.55E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-3.545.48E-11
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-2.601.43E-11
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.415.65E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-3.673.71E-14
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h-1.931.74E-09
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h-1.971.39E-04
GSE5685Col, WT, control 16 hCol, WT, Ps ES4326 AvrRpt2 16 h-1.564.29E-03
GSE5685Col, WT, control 16 hCol, WT, Ps ES4326 16 h-1.513.13E-02
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.601.46E-03
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h-2.462.17E-05
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-1.643.99E-03






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