gene detail

Gene description

TAIR ID: AT4G01410

Short description: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Pathogen responsiveness: -1.18

General responsiveness: -1.46

Orthologous

Rice:

OS05G0367900

Maize:

GRMZM5G826767

Wheat:

TA.14111.1.S1_AT TA.14111.1.S1_X_AT

GO biological process

unkown

GO cellular component

integral component of membrane, plasma membrane, plasmodesma

GO molecular function

unkown

Protein domain

Pfam	PF03168, Late embryogenesis abundant protein

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260, AT5G61850, AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 89 (Top5%)

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE26679_EDR1_GC  view

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17382	Col, WT, Flg22 0 min	Col, WT, Flg22 60min	-1.75	4.02E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.72	5.88E-03
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.55	8.52E-09
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	-2.30	1.06E-03
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	-1.52	4.74E-08
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-1.56	2.88E-08