gene detail

Gene description

TAIR ID: AT4G01060

Short description: CAPRICE-like MYB3

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous

Rice: No orthologous gene

Maize:

Wheat: No orthologous gene

GO biological process

regulation of transcription, DNA-templated, regulation of transcription from RNA polymerase II promoter, response to salt stress, response to abscisic acid, transcription, response to salicylic acid, response to jasmonic acid, trichome differentiation, vegetative to reproductive phase transition of meristem, root hair cell differentiation

GO cellular component

nucleus

GO molecular function

transcription factor activity, RNA polymerase II transcription factor recruiting, sequence-specific DNA binding, RNA polymerase II transcription factor activity, transcription regulatory region DNA binding

Protein domain

Pfam	PF00249, Myb-like DNA-binding domain
SMART	SM00717, SANT

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G63650, AT4G18770, AT3G27920, AT1G24260, AT5G41315, AT5G61850, AT5G14750, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE45212_MED14_PSTDC3000_AVRRPT2 view

Differentially expressed condition

9 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Di2, WT, control	Di2, WT, TEV 21 d	-1.97	4.48E-03
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.59	8.69E-03
GSE37269	Ler0, WT, control	Ler0, WT, TEV 21 d	-1.62	1.02E-02
GSE37269	Oy0, WT, control	Oy0, WT, TEV 21 d	-1.97	3.31E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.54	1.38E-05
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-1.73	1.15E-02
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.57	2.01E-06
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	-2.30	2.69E-07
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-2.15	5.36E-07