gene detail

Gene description

TAIR ID: AT4G00490

Short description: beta-amylase 2

Pathogen responsiveness: -0.43

General responsiveness: 0.41

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

polysaccharide catabolic process

GO cellular component

chloroplast, chloroplast stroma, cytoplasm

GO molecular function

beta-amylase activity, amylopectin maltohydrolase activity

Protein domain

Pfam	PF01373, Glycosyl hydrolase family 14

Metabolic pathway

PWY-6724: starch degradation II

KEGG pathway

PATH:ath00500: Starch and sucrose metabolism

Transcriptional regulation

Regulator:
AT5G53660, AT5G11260

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

Differentially expressed condition

15 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE13739	Col, WT, control 0 h	Col, WT, G.orontii 6 h	1.54	2.16E-11
GSE17464	Penta, control	Penta, PstDC3000 12 h	1.60	6.31E-03
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.55	9.55E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-3.43	3.83E-10
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	-1.80	3.32E-02
GSE50526	Col, WT, mock 9 h	Col, WT, A. brassicicola 9 h	-1.78	1.95E-02
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.39	5.81E-07
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-2.23	2.92E-14
GSE56094	Col, WT, control 10 h	Col, WT, hrpA- 10 h	-1.77	5.02E-09
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	-2.09	1.11E-12
GSE56094	Col, WT, control 11 h	Col, WT, hrpA- 11 h	-1.82	1.38E-09
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.78	4.24E-10
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-1.75	5.69E-10
GSE56094	Col, WT, control 8 h	Col, WT, hrpA- 8 h	-1.53	2.08E-07
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	-1.52	4.34E-02