Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G00490

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006793: phosphorus metabolic process0.00E+00
2GO:0006182: cGMP biosynthetic process0.00E+00
3GO:0009617: response to bacterium3.21E-05
4GO:0006099: tricarboxylic acid cycle4.45E-05
5GO:0051938: L-glutamate import5.03E-05
6GO:1990641: response to iron ion starvation5.03E-05
7GO:0010726: positive regulation of hydrogen peroxide metabolic process5.03E-05
8GO:0010421: hydrogen peroxide-mediated programmed cell death5.03E-05
9GO:0006007: glucose catabolic process5.03E-05
10GO:0046244: salicylic acid catabolic process5.03E-05
11GO:0043091: L-arginine import1.23E-04
12GO:0051592: response to calcium ion1.23E-04
13GO:0015802: basic amino acid transport1.23E-04
14GO:0044419: interspecies interaction between organisms1.23E-04
15GO:0006101: citrate metabolic process1.23E-04
16GO:0042742: defense response to bacterium2.00E-04
17GO:0010351: lithium ion transport2.11E-04
18GO:0010118: stomatal movement2.41E-04
19GO:0006882: cellular zinc ion homeostasis3.09E-04
20GO:0045017: glycerolipid biosynthetic process3.09E-04
21GO:0002239: response to oomycetes3.09E-04
22GO:0002229: defense response to oomycetes3.23E-04
23GO:0010150: leaf senescence3.35E-04
24GO:0006097: glyoxylate cycle5.26E-04
25GO:0010225: response to UV-C5.26E-04
26GO:0034052: positive regulation of plant-type hypersensitive response5.26E-04
27GO:0006468: protein phosphorylation5.81E-04
28GO:0006561: proline biosynthetic process6.44E-04
29GO:0010942: positive regulation of cell death6.44E-04
30GO:0006121: mitochondrial electron transport, succinate to ubiquinone6.44E-04
31GO:0010256: endomembrane system organization6.44E-04
32GO:0006499: N-terminal protein myristoylation6.61E-04
33GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response7.68E-04
34GO:0006120: mitochondrial electron transport, NADH to ubiquinone7.68E-04
35GO:1900056: negative regulation of leaf senescence8.97E-04
36GO:0019745: pentacyclic triterpenoid biosynthetic process8.97E-04
37GO:0030026: cellular manganese ion homeostasis8.97E-04
38GO:0006102: isocitrate metabolic process1.03E-03
39GO:0009061: anaerobic respiration1.03E-03
40GO:0009636: response to toxic substance1.07E-03
41GO:0006855: drug transmembrane transport1.11E-03
42GO:0006952: defense response1.11E-03
43GO:0010120: camalexin biosynthetic process1.17E-03
44GO:0009751: response to salicylic acid1.21E-03
45GO:0009408: response to heat1.23E-03
46GO:0010112: regulation of systemic acquired resistance1.32E-03
47GO:0043067: regulation of programmed cell death1.47E-03
48GO:0009626: plant-type hypersensitive response1.59E-03
49GO:0055062: phosphate ion homeostasis1.63E-03
50GO:0009620: response to fungus1.64E-03
51GO:0009624: response to nematode1.80E-03
52GO:0006790: sulfur compound metabolic process1.96E-03
53GO:0012501: programmed cell death1.96E-03
54GO:0009718: anthocyanin-containing compound biosynthetic process2.14E-03
55GO:0046686: response to cadmium ion2.27E-03
56GO:0034605: cellular response to heat2.32E-03
57GO:0002237: response to molecule of bacterial origin2.32E-03
58GO:0046854: phosphatidylinositol phosphorylation2.50E-03
59GO:0005992: trehalose biosynthetic process2.88E-03
60GO:0030150: protein import into mitochondrial matrix2.88E-03
61GO:0006874: cellular calcium ion homeostasis3.08E-03
62GO:0003333: amino acid transmembrane transport3.29E-03
63GO:0016998: cell wall macromolecule catabolic process3.29E-03
64GO:0071456: cellular response to hypoxia3.50E-03
65GO:0019748: secondary metabolic process3.50E-03
66GO:0006457: protein folding3.51E-03
67GO:0006814: sodium ion transport4.83E-03
68GO:0009860: pollen tube growth5.09E-03
69GO:0006979: response to oxidative stress6.24E-03
70GO:0009615: response to virus6.85E-03
71GO:0016311: dephosphorylation7.96E-03
72GO:0008219: cell death8.24E-03
73GO:0009817: defense response to fungus, incompatible interaction8.24E-03
74GO:0009407: toxin catabolic process8.82E-03
75GO:0042542: response to hydrogen peroxide1.13E-02
76GO:0051707: response to other organism1.16E-02
77GO:0031347: regulation of defense response1.33E-02
78GO:0006812: cation transport1.37E-02
79GO:0009664: plant-type cell wall organization1.37E-02
80GO:0042538: hyperosmotic salinity response1.37E-02
81GO:0006417: regulation of translation1.54E-02
82GO:0009555: pollen development1.54E-02
83GO:0007165: signal transduction1.57E-02
84GO:0006096: glycolytic process1.62E-02
85GO:0009845: seed germination2.29E-02
86GO:0006413: translational initiation2.59E-02
87GO:0007166: cell surface receptor signaling pathway2.99E-02
88GO:0009414: response to water deprivation3.04E-02
89GO:0015031: protein transport3.95E-02
90GO:0080167: response to karrikin4.32E-02
91GO:0045454: cell redox homeostasis4.91E-02
RankGO TermAdjusted P value
1GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
2GO:0005524: ATP binding4.23E-05
3GO:0008517: folic acid transporter activity1.23E-04
4GO:0003994: aconitate hydratase activity1.23E-04
5GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity1.23E-04
6GO:0004674: protein serine/threonine kinase activity2.02E-04
7GO:0004383: guanylate cyclase activity2.11E-04
8GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity2.11E-04
9GO:0016301: kinase activity2.90E-04
10GO:0015189: L-lysine transmembrane transporter activity3.09E-04
11GO:0015181: arginine transmembrane transporter activity3.09E-04
12GO:0042299: lupeol synthase activity3.09E-04
13GO:0015368: calcium:cation antiporter activity4.15E-04
14GO:0015369: calcium:proton antiporter activity4.15E-04
15GO:0005313: L-glutamate transmembrane transporter activity4.15E-04
16GO:0016866: intramolecular transferase activity4.15E-04
17GO:0000104: succinate dehydrogenase activity5.26E-04
18GO:0008177: succinate dehydrogenase (ubiquinone) activity5.26E-04
19GO:0043531: ADP binding6.56E-04
20GO:0016614: oxidoreductase activity, acting on CH-OH group of donors6.92E-04
21GO:0050660: flavin adenine dinucleotide binding7.01E-04
22GO:0004144: diacylglycerol O-acyltransferase activity7.68E-04
23GO:0051920: peroxiredoxin activity7.68E-04
24GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity7.68E-04
25GO:0051539: 4 iron, 4 sulfur cluster binding8.56E-04
26GO:0015491: cation:cation antiporter activity1.03E-03
27GO:0016209: antioxidant activity1.03E-03
28GO:0009055: electron carrier activity1.34E-03
29GO:0015174: basic amino acid transmembrane transporter activity1.47E-03
30GO:0008559: xenobiotic-transporting ATPase activity1.79E-03
31GO:0015266: protein channel activity2.14E-03
32GO:0005199: structural constituent of cell wall4.60E-03
33GO:0048038: quinone binding5.32E-03
34GO:0008137: NADH dehydrogenase (ubiquinone) activity5.32E-03
35GO:0004197: cysteine-type endopeptidase activity5.56E-03
36GO:0051213: dioxygenase activity6.85E-03
37GO:0030247: polysaccharide binding7.68E-03
38GO:0008757: S-adenosylmethionine-dependent methyltransferase activity7.96E-03
39GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity8.24E-03
40GO:0015238: drug transmembrane transporter activity8.53E-03
41GO:0030145: manganese ion binding9.12E-03
42GO:0050897: cobalt ion binding9.12E-03
43GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors9.73E-03
44GO:0004364: glutathione transferase activity1.13E-02
45GO:0015171: amino acid transmembrane transporter activity1.54E-02
46GO:0030246: carbohydrate binding2.07E-02
47GO:0015297: antiporter activity2.63E-02
48GO:0016757: transferase activity, transferring glycosyl groups2.90E-02
49GO:0008194: UDP-glycosyltransferase activity2.95E-02
50GO:0003743: translation initiation factor activity3.04E-02
51GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.23E-02
52GO:0008168: methyltransferase activity3.61E-02
53GO:0004601: peroxidase activity3.71E-02
54GO:0052689: carboxylic ester hydrolase activity4.64E-02
RankGO TermAdjusted P value
1GO:0045273: respiratory chain complex II1.93E-05
2GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)1.93E-05
3GO:0009530: primary cell wall2.11E-04
4GO:0005886: plasma membrane4.38E-04
5GO:0005788: endoplasmic reticulum lumen4.92E-04
6GO:0031305: integral component of mitochondrial inner membrane1.03E-03
7GO:0009705: plant-type vacuole membrane3.07E-03
8GO:0005744: mitochondrial inner membrane presequence translocase complex3.93E-03
9GO:0016592: mediator complex5.56E-03
10GO:0016021: integral component of membrane8.69E-03
11GO:0000325: plant-type vacuole9.12E-03
12GO:0005747: mitochondrial respiratory chain complex I1.65E-02
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Gene type



Gene DE type