Gene: AT4G00050
     

Gene description


TAIR ID: AT4G00050

Short description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Pathogen responsiveness: 0.40

General responsiveness: 1.96

Orthologous


Rice:

OS10G0556200   OS03G0782500  

Maize: No orthologous gene
Wheat:

TA.26797.1.A1_AT  


GO biological process


double fertilization forming a zygote and endosperm, transcription, DNA-templated, regulation of transcription


GO cellular component


nucleus, plasmodesma


GO molecular function


DNA binding, protein dimerization activity, transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF00010, Helix-loop-helix DNA-binding domain
SMARTSM00353, HLH

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


33 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, erf104 ko, water 4 hCol, erf104 ko, Flg22 4 h-2.061.59E-02
GSE12856Col, WT, controlCol, WT, Bg h-1.698.13E-09
GSE12856Col, ataf1, controlCol, ataf1, Bg h-2.148.37E-10
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 1 h-1.701.90E-02
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h-2.448.00E-04
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-1.972.91E-03
GSE17464Laer, controlLaer, Flg22 2 h-1.922.60E-03
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-2.382.58E-04
GSE17464Penta, controlPenta, Flg22 2 h-2.303.74E-04
GSE17464Penta, controlPenta, Flg22 2 h-2.812.49E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.515.77E-08
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.973.48E-03
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.755.46E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-1.821.56E-02
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-1.969.91E-03
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.636.09E-10
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.981.40E-11
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h-1.935.76E-03
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-2.041.46E-04
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-2.157.34E-05
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.831.88E-03
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-2.071.06E-13
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-1.695.24E-09
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.797.64E-11
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-1.563.36E-08
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.284.43E-15
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.592.97E-18
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-1.882.36E-11
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-1.845.26E-10
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.561.37E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.567.24E-09
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min2.261.06E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min2.808.81E-04






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